Tachysurus vachellii: 132860407
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Entry
132860407 CDS
T09596
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132860407
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132860407
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
Ion_trans
TRP_2
PKD_channel
Ank_2
zf-C2HC_2
Zn-C2H2_12
Motif
Other DBs
NCBI-GeneID:
132860407
NCBI-ProteinID:
XP_060747578
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All DBs
Position
17:complement(16360669..16373469)
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AA seq
1346 aa
AA seq
DB search
MAPVGIKHVVSFTSEDPKHRVVNLCCGGEGSSPWLCSAAERSGLLKAELQLDRASSIAFI
DVGNHGSAFVQVDVGRSSWPIDHPYVTLLPTATLMSPADSRQGTGKHSVRMFKKGDFLPQ
AAEESWDRLRITCSQPFNKRNQFGLSFFRVRTANEHAEEPSANQENLTTQNKTTPDKTWS
VREWISSPPVQHTFFGQKPGEISPGEPTKDHGKLSRAERMVTAAQNIRRSLHKASCNALI
SSRERQEKSQNTQHGTDRTRACRRKSETIQKPASMSSTPKRSRCGTSDVLATQKKNNMFR
HSPVKSHIPATSPPKYSTDPEPPETVCPICGVSFSPEYLPLHASSCLDSGAFSSVTQREP
GSSFSFHQPSDPSTDELMVPCPMCTFRFPFDCIQQHASNCGEFCDMMEHLTSNFQADQWR
EIVNKKMRFPPELIGAIQEGKVVMIRSLLKTGDGIIRQLEDSEDRQWREALNLSIRLGNE
DAMVTLLHGVKFDFRQIHEALLVAVDTNQPRIVKRLLDRLDQEKGNKMDVHSFNQAIFDH
SIDDSQFAPGVTPLTLACQKDLYDIVTMLTQKGHVIPWPHKVSCSCLECRNGRQYDLLKF
SLSRINTYRGLASRAYLSITAEDSMLSAFYLSRDLRKLSKREPEFKPQYLALEELCQDYA
VELLGMCRNQSEVTTILNNCGFENEDTQEELDKHLFEEGIPNLARLRLAVNYNQKKFVAH
PICQQVLSSIWSGNISGWRGSRTAWKLLVAVGLFITMPFLCFIYWIAPKSKVGKILKVPV
VKFMLHSASYLWFLITLLVESIIMERFREGSITRQQTLLYNTVHMVWVAGFFWFECKEVW
IEGLRSYFRDLWNCLDVMVLSMYLASFSLRVVILVKGSFLCHLPENEIECIYFNQSARAD
WHQEDPQMIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISMGKMIDDMMRFLFILMIIG
TAFLCGINNIYVSYVSSEKLGRFNETFQFLFWTMFGVVNKENVDMPNYAVAEFVGRILYG
IYTLLIVIVLLNTFVAMITNSYQKIEDDADVEWKFARSKLYLSYFREGLTMPVPFNIIPS
PKAFFYLIRFKCIYLFLSLIRKLCCFCNFNSTPDYPPIDTMNNETDDKASYRNQVIRALV
QRYIESARREFEETKRKDIGNRVTELSKVVGHLHSEMKQIHQTMLDFEQNRTDPSGRSTS
SIIGKYIQGAKNNFRDFNSGVPSDGMSAPLLANIHNPKSDDVGNVNIEKSKDMDEAADKG
KLEEEEDEGAGEEIREQDGNDQIEGKEEEDAPSDESNDRILVEDETTKMEEGRANERKEE
SLISSSESQDTGFGSQEGELSDNSPE
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagttggaattaaacacgtcgtctccttcacgtcagaggacccgaagcaccgt
gtggtgaacttgtgctgtggcggtgaaggaagcagcccgtggctgtgtagtgcagcggag
cggagcggccttctaaaagccgagctgcagctggaccgggcttcatccatcgcctttatt
gacgttggaaatcatggctctgcattcgttcaggtggatgtgggccgttcttcatggcct
atagatcatccttatgtcacactgctgccaactgcgaccctgatgagcccagctgattca
cgacaaggcacaggaaagcacagtgtgcgcatgttcaaaaaaggtgatttcttgccccag
gctgctgaagagagctgggaccggctgaggatcacctgcagtcagcccttcaacaaacgc
aaccaatttggcctgtctttctttcgtgtccgcactgccaatgaacacgctgaagagcct
tctgccaatcaggaaaatctaactacccaaaataagactacaccagataagacatggtca
gtaagagagtggatctctagccctcctgtacaacacacgttctttggtcagaagccagga
gaaatctctccaggagaacccacgaaagatcatgggaaactgagcagggctgaacgcatg
gtaacagctgcacagaacatcaggcgctctctacacaaagcctcttgcaatgcattaatc
agcagtagggagagacaggagaagtcccagaacacacagcatggtacagacaggacccgg
gcatgtaggagaaagtcagaaacaatacaaaagccagcgagcatgtcctctactccaaag
aggtccagatgtggtacatcagatgttcttgccacccagaagaaaaataatatgttcagg
cacagccctgttaaatctcatataccagcaacatcaccaccaaagtacagcacagatcct
gaacctcctgagactgtatgcccaatatgtggagtgtctttcagtccagaatacttgcct
cttcatgcctcttcctgtctggattctggtgcattctcgagtgtcacacagagagagcct
gggtcatctttttcctttcatcaaccttctgatccaagcacagatgagctcatggtgcca
tgtcctatgtgcaccttcagattccctttcgactgcatccaacagcatgccagtaactgt
ggcgaattttgtgacatgatggagcacctcacgtctaacttccaggcagatcaatggcgc
gagattgtgaacaagaagatgcgctttcccccggagctcatcggcgccattcaggaggga
aaagtggttatgatccgtagtcttctgaagactggtgatggtatcatccgccagttagaa
gactcagaagacaggcaatggagagaagcactgaacctgtccatccgcctgggcaacgag
gatgccatggtcactttgctacatggagtcaagtttgattttcgacagatccatgaggct
cttttggtggctgttgacactaaccagccacgaattgtgaagcgcctccttgaccgtctt
gaccaagagaaaggcaacaagatggatgtgcactcttttaaccaggccatttttgaccac
tccattgatgattctcagtttgcccctggggtgacccccttgacactggcctgccagaag
gatctatatgacattgtgactatgctcacacagaaaggccatgtcatcccatggcctcac
aaggtttcctgttcttgtcttgagtgccggaatgggcgccaatatgacttgctcaagttc
tcactgtcacgtattaacacttaccgtggccttgctagccgggcatacttgtccatcact
gctgaagattccatgttgagtgctttttatcttagcagggaccttcgcaaactctctaag
agggagccggagtttaagcctcagtaccttgcactcgaggagctgtgtcaggactatgca
gtggaattactgggaatgtgccggaatcagagtgaggttaccaccattcttaacaattgt
ggctttgaaaatgaagacactcaagaagagctagataaacacttattcgaagagggcata
ccaaacctggcccgattacgactcgctgtgaactacaaccagaaaaagtttgtagcccac
ccaatttgccagcaggtcctttcctccatctggtctggaaacatatctggctggagaggc
agcaggacagcatggaaactcctggtggctgtggggctctttataaccatgcctttcctc
tgcttcatctactggattgcccccaagtcaaaggtgggaaagattttgaaagttcctgtg
gtcaaattcatgcttcactctgcctcctatttgtggttcctcatcacactgctagtggaa
tctataatcatggagaggtttcgtgaggggtctataaccaggcaacagaccttgttgtac
aacactgtccacatggtgtgggtggctgggtttttctggtttgagtgtaaggaggtttgg
attgaggggctgaggagctacttccgggacttgtggaattgtctggatgtgatggtgctc
agcatgtatctggcctcattttctctgcgagtggtcattctggttaaaggctcctttctg
tgccacttaccagaaaatgagattgagtgcatctactttaaccagtctgctcgtgcagat
tggcatcaggaggaccctcagatgatagccgaagtgctctttgctgtcaccagcatgctg
agtttcacacgtttggcctacatcctgcctgcacacgagtctctaggaacgcttcagatc
tctatgggaaagatgattgatgatatgatgaggttcttgtttatactgatgatcatcggt
acagcctttttgtgtggcatcaacaatatctatgtttcttacgtcagctctgaaaaactt
ggaaggttcaatgagactttccagttcttgttctggacaatgtttggtgttgtcaataag
gaaaatgtggatatgcctaattatgctgtggctgagtttgtgggcagaatcctatatggg
atctacacactactgatcgtcattgtgctactaaacacattcgttgctatgatcacaaat
tcttatcagaagattgaggatgatgcggatgtggagtggaaatttgctcgctccaaactc
tatctgagctacttcagggagggcctcacaatgcctgttcccttcaacatcattccctca
cctaaagctttcttctacctcatacggttcaaatgcatttatttgtttttatctttgatt
agaaaactatgctgcttttgcaacttcaactcgaccccggactatccgcccatcgacact
atgaataatgagacagatgataaggcgtcatacagaaatcaggtgatccgggctttagtg
cagcgctacattgaatctgccaggagagagtttgaggagacaaaacgcaaagatattgga
aaccgggtcacagagctgagtaaagtggttggacatctgcacagtgagatgaagcaaatt
caccagacgatgttagacttcgagcagaaccgaacagatccttcagggcgaagcacttcc
tccatcatagggaagtacatccagggtgccaaaaacaactttagagattttaacagcggc
gtgccttcagacggcatgagtgctcctttgctggccaacatccacaatcctaagtctgat
gacgttggtaatgtgaacatagagaagagtaaagatatggatgaggctgctgataaaggc
aagttagaggaggaggaggatgaaggagcaggtgaagagataagggaacaggatggtaat
gatcaaattgaaggtaaggaagaggaagatgcacccagtgatgagagtaatgatcggatt
ctggtcgaagatgaaacaacgaagatggaggaggggagagccaatgaaagaaaagaagaa
tcactcatcagcagcagtgaatctcaggatactgggtttggttctcaagaaggagaactc
tctgataacagtcctgagtaa
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