Tachysurus vachellii: 132860624
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Entry
132860624 CDS
T09596
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
tvc
Tachysurus vachellii
Pathway
tvc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132860624 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132860624 (lrrc4ba)
Cell adhesion molecules [BR:
tvc04515
]
Immunoglobulin superfamily
NGL family
132860624 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
LRRNT
Ig_2
LRR_EndoS
DUF7617
Motif
Other DBs
NCBI-GeneID:
132860624
NCBI-ProteinID:
XP_060747854
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All DBs
Position
18:1281702..1324235
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AA seq
728 aa
AA seq
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MRITTVTGLPNPSPFFFLLAQLQFWLLLLGQDIAGATSTCPTPCSCSNQASRVICTRRNL
DEVPENISNNTRYLNLQENSIQVIRSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTPLIRLEELELSGNRLEIIRPGSFQGLESLRK
LWLMHSQMSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPYLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTSMTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADTSVNYTYFTTVTVETVESTGEEDSALRSINETIIHIPGPT
PSGRLWHDGISTTASSLSVFGSSSSPRATKPTFTVSVSEPSYPTGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPTRAIEILNVEDELGASASVLGSGISGGSTMP
QAGSSGGSQSLRLHHPEIVNLPNLARTDHLNHYYKPHHFNNNMMSLGLSGSSGMGLNNNN
NPCSQTQPMPISCSQVPVSVSSIPSSMPLPTLSIHGSLKGLMGKGQNPQIEPLLFKSGSK
ENVQETQI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaccacggtgactggccttccaaacccctcccccttctttttcctattggcc
cagctgcagttttggctcctcctcctgggccaagacatcgcaggagccacatcaacctgc
ccgacgccttgcagctgctccaatcaagcgagccgagtgatctgtacgagacgaaacctg
gacgaggttccggaaaatatatccaacaacacgcgatacctcaacttacaggagaactcg
atacaggtgataagatcagataccttcaagcacttacggcacttggagatcctccagctt
tccaagaaccagattcgtcagattgaagttggtgcattcaatggcctcccaaacctcaac
actttggaactgtttgacaaccgtctcacactggtgccatcacaggcgtttgagtatctc
agcaagcttcgggagctctggcttcgaaacaacccaattgagacactgccaggctatgcc
ttccaccgcgtgccctcccttcgccgtcttgatctgggtgagctcaaaaagctggactac
atttcagacgctgcctttgttggtcttgttaatctgcgctacctgaacctgggcatgtgt
ggcctgaaggacatccccaacctgacacctctgatccggctggaggaactggagctctct
ggaaacaggctggaaatcatacggcctggatcattccaaggcctggagtctttgcgcaaa
ctgtggcttatgcactcccagatgtctgtcatagaacgcaatgcctttgatgacctcaag
agtctggaagagttgaatctatcccacaattctttgcattcactgcctcatgaccttttc
acgccattgcagaagctggagagagtgcacctcaaccacaatccctgggtgtgcaattgt
gacgtgttatggcttagctggtggctgaaagaaaccgtaccaagcaacacaacttgctgt
gcccggtgccatgcaccaccatacctgaagggcaaatacattggagagctggaccaaagc
cacttcacatgctatgcccctgttattgttgagccccccactgacctcaacgtgaccgaa
ggcatggctgctgaactcaagtgccgcacgggaacctccatgacatctgtaaactggatt
actcccaatggaaccctgatgacccatggatcatatcgggtccggatctctgtgctgcat
gatggaactctgaatttcacaaatgtcaccttgcgtgacactggtcagtacacctgcatg
gtgaccaactcggcaggcaacaccacagcaactgccgtcctgaatgtcactgcagcagac
accagtgttaattacacttactttactaccgtgactgttgaaactgtggaatctactgga
gaagaggattcggccttacgttcgatcaatgagactattatccacatccctggccctaca
ccgtctggacgtctctggcatgatggcatctctacgacagcttcttctctatcagttttt
ggatcctcgtcttctccccgagcaaccaaaccaacgtttactgtttcagtctctgagcca
agctaccccaccgggctagatgatgtaatgaagactaccaagatcatcatcggctgcttt
gtggctattaccttcatggcagctgtcatgctggtggtcttctacaagctgaggaagcag
caccagttgcacaagcaccatggacctacgagagccattgaaattctcaatgtagaggac
gaactcggagccagcgccagtgttcttggaagcgggatttctggtggatccaccatgccc
caggccggatccagtggaggaagccaaagcctgaggctgcatcatccggagatcgtcaat
ctacccaacctggctcggacggaccaccttaaccactactacaagccccaccacttcaac
aacaacatgatgagtttggggctctctggaagctctggaatgggcctcaacaacaacaac
aacccttgttcccagacccagcccatgccaatctcctgctcccaggtgcctgtctctgtg
agctccattccctcctcgatgcccctgcctacccttagcatccatggatcactcaaaggc
ttaatgggtaaagggcagaaccctcaaatcgagcctttactctttaagagtggctccaag
gagaatgtccaagagactcagatctaa
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