Tachysurus vachellii: 132860989
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Entry
132860989 CDS
T09596
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tvc
Tachysurus vachellii
Pathway
tvc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132860989 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132860989 (gtf2f1)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
132860989 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
132860989
NCBI-ProteinID:
XP_060748293
LinkDB
All DBs
Position
18:22372203..22377195
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AA seq
548 aa
AA seq
DB search
MASLVNSSSSTEYVVRVPKNTSKRYSIMAFNAGDKVNCSTWTQARMERDLSNRRMYGEEE
TPEGAAGSEFGKKHREEARRKKFGIVTREFKVEDQPWILKVNGKSGRRFKGQKKGGVTEN
ASYYIFTQCADGAFEAFPVHAWYNFTPVAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQRR
LKEQEHGEEEEEEGEKGAKKKKKKKGGQGGDLRIHDLDDDLELSSDNSESSAGEDGEGQS
KSKKENSSKSKGKKKKKKKGSDAEGHEDSDDGDFEGLEVDYMSDESSSEEEEPEKIKPNK
GEDVPKGIDEASESEEESEEENKNEDEAKEEEEEEDGKKTPVQVEKKKKKDSSGESDSSE
DSDIEGETASALFMAKKRTPPKRGGRGSAGSSRAGSRPGTPSIDHAATSNTLRAAASKLE
QGKRQAAMSSSDTPAAKRLKMEPTSQSPSGKSTPQPASGKSTPSSRYHLTFLPGPRLVPL
SDVQLTEEAVRRYLIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKKLNPERKNIND
KMHFYLTE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcactggtaaacagcagttcctccactgagtatgtcgtccgagtaccaaagaac
acaagtaagaggtacagcatcatggctttcaacgctggagacaaagtgaactgttccaca
tggactcaggctcggatggagcgggatctgagtaacaggaggatgtacggtgaagaggag
acaccagagggagctgccggcagtgagtttggtaaaaaacatagggaggaggcacgcagg
aagaagtttgggatcgtaactcgtgagtttaaggtagaggaccagccatggatcctcaag
gtgaacgggaaatcagggagaaggtttaaggggcagaagaaaggaggcgtgacagagaac
gcttcatactacatcttcacacagtgtgctgacggagcattcgaggcttttcctgttcac
gcctggtacaacttcaccccagtggctaaacaccgcacgctcactgccgaggaggccgag
gaggagtggggcaggaggaataaagtggtgaatcacttcagtatcatgctgcagcggcgg
ctgaaagagcaggaacatggtgaggaagaagaagaggaaggggaaaaaggagcaaagaag
aagaagaagaaaaaaggtggccagggaggagaccttcgtattcatgacctagacgatgat
ctggaattgagcagtgataacagtgagagcagcgcaggtgaagacggagaaggtcagtca
aagagtaagaaagagaacagttcaaagtccaaggggaaaaagaagaaaaagaagaagggc
agtgatgcggagggacatgaggacagcgatgatggagactttgaaggtctggaagtagac
tacatgtctgatgagagcagttctgaggaggaggagcctgagaaaatcaagcctaataaa
ggagaggacgtgcctaaaggaatcgatgaagcatcggagagtgaggaggagagtgaggag
gagaacaagaacgaagatgaggccaaagaggaggaggaggaggaagatggcaagaagact
cctgtgcaggtggagaagaagaagaagaaagacagcagcggagagtccgacagctctgag
gacagtgacattgagggagaaacggcgtctgcgctcttcatggcgaagaaacgcactcct
cctaaaagaggtggtcgaggttctgctggaagttctagagcaggaagtcgtccaggaaca
ccttccattgaccatgctgcaacctccaacacactgcgagctgccgcaagcaaactggag
cagggtaagcgtcaggcagccatgtccagctcagacacgcctgctgccaagaggctgaag
atggagccgacttctcagagtccgtcgggaaagagcactccacaaccagcttctgggaaa
tccacaccaagctccaggtatcatctcaccttcttgccagggccaaggctggtaccgctt
agtgacgtgcagctgaccgaagaggctgtgcgccgttatctgatcagaaaacccatgacc
actaaagacctgctgaagaagttccagaccaaacgcactggactgagcagcgagcagacg
gtcaatgtcctcgcacagatcctcaagaaactaaacccagagaggaaaaacatcaacgac
aagatgcacttctatctcactgagtag
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