Tachysurus vachellii: 132861367
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Entry
132861367 CDS
T09596
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
132861367
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132861367
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
132861367
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
BNR_3
Motif
Other DBs
NCBI-GeneID:
132861367
NCBI-ProteinID:
XP_060748845
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Position
2:936521..1018825
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AA seq
1220 aa
AA seq
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MLPAKDGDVWLEPSQNSMMANPRKMDLIIPRFYDVPCDSNGQRMWWAFLASSMVTFFGGL
FIILLWRTMRYLWTVCCHCNPKKKDVQRVSSVEKKDSTVVSEVGWMTSVKDWAGVMISAQ
TLTGRVLVVLVFVLSIAALVIYFIDSSNPIESCQHFDKDFTLQIDMGFNIFFLLYFGLRF
IAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILK
TSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNFQQLSYWECVYLLMVTMSTV
GYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVC
GHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNP
HDLARVKIESADACLILANKYCPDPDAEDASNIMRVISIKNYHPKIRVITQMLQYHNKAH
LLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYY
LEGVANEMYTEYLSSAFVGLSFPMVCELCYVKLKLLLIAIEHKTDQRESSTLINPGNHVK
MQEGTLGFFIASDAKEVKRALYYCKACHDDITDPKRIKKCGCKRPKMTGSRRMRLVCCLC
CGEAEHGCSCTSRSTRSNVETPPCALPLSPASVSDKLAALRSSKSNYNGYIKSTMDAPVV
QQSTLSPKKKPRNGGMRTSPNCSPKTIRLLSMSRHDPVLIPSHDQMETMDDNVKRYDSTG
MFHWCPSRDIERVVLTRSEAAMTVLSGHVVVCIFGDVKSAVVGLRNLVMPLRASNFHYHE
LKHIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNI
DDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPENSPVHGLERQTSI
STGANIPIITELAKSDRLLNAVCVRQDKSCGTNIPMITELVNDSNVQFLDQDDDDDPDTE
LYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGG
YSDTHTLANRDRCRVAQLALYDGPFAQLGEGGCYGDLFCKALKTYNMLCFGIYRLRDAHL
DAPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAAHCRSTLSHSSHSSHSSSKKSSS
VHSISTKHAKTREPRDKPNC
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgcttccagctaaagatggtgacgtttggctcgaaccctctcaaaactccatgatggcc
aacccgaggaagatggacctgatcatcccacgcttttatgatgtgccgtgcgacagtaat
ggccagcgcatgtggtgggccttcctcgcctcatccatggtcacgttctttggtggtctc
ttcatcatcctgctgtggaggacgatgcggtatctgtggaccgtgtgttgccactgcaac
ccaaaaaaaaaggatgttcagagggtcagcagcgtggagaagaaggacagtacagtggtc
agtgaggtgggctggatgacctcggtgaaggactgggccggggtcatgatctccgcacag
acgctcaccggacgtgtgctggtggtgctggtgtttgtcctcagtattgcggcactcgtc
atttacttcatcgactcctccaatccgattgagtcgtgtcagcactttgataaagatttc
acactgcagatagacatgggcttcaacatcttcttcctgctctactttggactgcgtttc
atcgcagcgaatgataagctgtggttctggttggaggtgaactcggtggtggatttcttc
accgtgccgccagtgtttgtgtctgtgtatctgaacaggagctggctgggtctgaggttt
ctaagagccttacggttgattcagttctctgaaatattacagtttctaaacatccttaaa
accagcaactcaataaagttggtgaacttgtgctccatctttattagcacatggctaacg
gctgcaggcttcatccacctggtggaaaattcaggcgatccatgggaaaactttcagaac
ttccagcaactgtcctactgggagtgtgtgtatttactgatggtgacgatgtccaccgtg
ggatacggagacgtgtacgctaaaaccacgctggggcgcctcttcatggtcttctttatc
ctcggtggactggccatgtttgccagctacgtgcctgaaatcatagaattaataggaaac
cgtaagaaatatggcggttcctatagtgcagtaaatgggagaaagcacattgtggtgtgt
ggtcacatcactctggaaagtgtttctaacttcctcaaagacttccttcacaaggacagg
gacgatgtcaatgtagaaattgtttttctccataatatttcccctaatcttgagttggaa
gccttgtttaagcgccacttcactcaggtagagttctaccagggttccgtcctaaatcca
catgatctggcccgagtcaagatcgagtcagcagacgcatgtttaattttagctaataaa
tactgcccagaccccgacgctgaggacgcgtccaacatcatgagagtgatatctataaaa
aactaccacccgaagatccgcgtcatcacacagatgctgcagtaccacaataaggctcac
ttgttgaacattccgagctggaactggaaggaaggtgatgatgcgatttgtctggcggag
ctgaagctgggattcatcgctcagagctgcctagcgcaggggctctccaccatgctggct
aatctcttctccatgaggtctttcattaagattgaagaggacacgtggcagaagtattac
ctggaaggagtagctaatgaaatgtacactgagtacctgtccagtgcctttgtgggttta
tccttccccatggtgtgtgagttatgttacgtgaagctgaagctcctcctgatagccatc
gagcataaaactgatcagagagagagcagtacactcattaacccaggcaatcatgtgaag
atgcaggaaggaactctgggtttctttattgctagtgatgccaaagaagtaaagagagct
ctttactactgcaaagcttgtcatgatgacatcacagacccgaaaaggataaagaagtgc
ggatgcaaacgacccaagatgacaggcagccgccgaatgcgactagtgtgttgtttatgt
tgcggcgaggctgagcacggctgctcgtgcacatctcgcagcacacgtagtaatgtggag
actcctccgtgtgcccttcctctttctcccgcctctgttagtgataagttggccgcttta
cgttcctctaaaagtaactataacggatatatcaaatcgacgatggacgccccggtggtg
cagcagtccactctgtcacctaagaaaaaaccacgcaatggaggaatgagaacttcacca
aactgctctccaaaaacgatacgactcttgtcaatgtccagacacgaccctgtgctgatc
cccagccacgatcagatggagacgatggacgataacgtgaagaggtacgactccaccgga
atgttccactggtgtccatcaagagacattgagagggtcgtactgactcgtagtgaagca
gccatgacggttctaagcggccatgtggtagtgtgtattttcggtgatgtgaagtccgct
gtggtgggtctgaggaacctggtgatgcctctgagagcgagtaacttccactaccatgag
ctaaaacacatcgtgtttgtgggatcactggagtacttgaagagggagtgggagacatta
cacaacttccctaaagtctccatattacctggcactcctctgagcagagcagatctgaga
gccgtcaacattaacctgtgtgacatgtgtgtgattctgtcggccaatcagaacaacatc
gacgatgcgtctctgcaggataaagagtgtattctcgcttcgctcaacatcaaatccatg
cagtttgatgacagtataggtcttctacaggctaactcacagggtttcactccacctggg
atggaccgctcgtctcctgaaaacagtcctgttcatggtctggagcgacaaacttccatc
agcactggagctaacatccccattatcactgagcttgctaaatcagacaggctgctgaac
gcagtgtgtgtaagacaggacaaaagttgcggaaccaacattccaatgattactgaactg
gtaaatgactcaaatgttcagttcctggatcaggatgatgacgatgatccagacactgag
ctctacctcacacagcccttcgcctgtggaactgccttcgccgtcagcgtgcttgactcc
ctaatgagtgccacctactttaatgacaatatcctgacgttaataaggacgttagtgaca
ggtggagccacgcccgagcttgaaggtttgttagcggaggagaacgcactacgtggtggc
tacagcgacacacacacactagccaacagggaccggtgtcgagtggcacagctggccctg
tacgatgggccattcgcccagctcggggaaggtgggtgttacggtgatttattctgtaaa
gcgttaaagacctacaacatgctgtgtttcgggatttaccgtttaagggatgctcacctg
gacgcaccaagtcagtgcaccaaacgctatgtgatcaccaatcctccgtacgagttcgag
ctggtccccacagacctgatcttctgtttgatgcagtttgatcacaatgcagctcactgt
cgctccacgctctcacactcctcacactcctcacactcgtccagtaaaaaaagctcctct
gtgcactccatcagcaccaaacacgccaagacccgagagccacgagacaaacccaattgc
tga
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