Tachysurus vachellii: 132861554
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Entry
132861554 CDS
T09596
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
tvc
Tachysurus vachellii
Pathway
tvc04136
Autophagy - other
tvc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132861554 (wipi1)
04136 Autophagy - other
132861554 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132861554 (wipi1)
03029 Mitochondrial biogenesis [BR:
tvc03029
]
132861554 (wipi1)
Membrane trafficking [BR:
tvc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
132861554 (wipi1)
Mitochondrial biogenesis [BR:
tvc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
132861554 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
ANAPC4_WD40
RMC1_N
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
132861554
NCBI-ProteinID:
XP_060749123
LinkDB
All DBs
Position
18:2939831..2965466
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AA seq
442 aa
AA seq
DB search
MESGDGGGGARGPELRCASFNQDSTSLAVGTKEGYRLFSVTAVDKLECIHESAENPDVYI
VERLFSSSLVVVVSHSMPRRMNVYHFKKGTEICNYSYSNSVLSVRLNRQRLVVCLEESIY
IHNIKDMKLLKTLLNTPSNPSGLCALSINHSKSYLAYPGSATIGEITIYDANNLNTVTEI
SAHDSQLAAITFNASGTKLASASERGTVIRVFSIPEGQRLFEFRRGMKRYVNISSLSFSP
DAQFLCASSNTETVHIFKLEQHGHGGEEENPSWSAYVGKMFSAASSYLPAQVSGMMSQDR
AFATVRLNTQGHKHTCTLTTIQKLPRLLVASSEGQLFIYNIDPQDGGECMLVHTHRLLGS
EDKAEVSEGTVAPSYAATAAIGTCGPASATLTGYSEDGGVMKGEVIPEHEFAAGPVCLDD
ETEFPPINRCLGGSRRGRTGHL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggagagcggagatggaggcggaggagcccgaggcccggaactgcgctgcgcctccttt
aaccaggactccacctcgctggctgtgggaactaaggaaggttacagactgttctcggtc
accgccgtggataaactggagtgcattcacgaaagcgccgagaatccggacgtctacatt
gtggagcgtttgttctccagcagcctggtggtggtggtgagtcactcgatgccgcggcgc
atgaacgtctaccacttcaagaaaggaacggagatctgcaactacagctactccaactcc
gtgctctccgtgcgcctcaaccgacagaggctggtggtttgtctggaagagtccatttac
atccacaacataaaggacatgaagcttctgaagactctcctgaacacaccatctaatccc
tcaggtctctgtgctctctctatcaaccattccaaatcttacctggcatatcctggcagc
gccaccatcggagaaatcactatttatgacgccaacaatctgaacacagtgaccgagatt
tcagctcacgacagtcagttagccgccatcaccttcaatgcctcaggcaccaaactggcc
agcgcttcagagaggggcacagtgattcgagtgttctccattccggaaggacagagactg
tttgagttccgcagaggaatgaaaagatacgtgaacatcagctctctgtccttcagtcct
gatgctcagttcctgtgtgcttcgagcaatactgagacggtccacatcttcaaactagaa
cagcatggacatggtggggaggaggagaacccctcgtggtcagcgtatgtggggaagatg
ttttctgcagcgagcagctacctgccagcgcaggtttcaggaatgatgagtcaggatcga
gcgttcgccacggtccgccttaacacacaaggccacaaacacacctgcactttaacaaca
atccagaagcttccgcggcttctcgtagcctcgtctgaagggcagctctttatttataac
atcgaccctcaggacgggggcgagtgcatgctggtacacacacacaggctgttaggatcg
gaagacaaagccgaggtgtctgagggaacagtggctccttcttacgctgccacagcagcc
attggcacctgcggacctgcttctgccacactaaccggctattccgaggatggaggagtg
atgaagggcgaggtgattccagagcacgagttcgccgccggtcccgtgtgcctggatgac
gagaccgagtttcctccaataaatcggtgtcttggtggatctcgtcgtggcagaaccggc
catctgtga
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