Tachysurus vachellii: 132861893
Help
Entry
132861893 CDS
T09596
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
tvc
Tachysurus vachellii
Pathway
tvc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132861893 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132861893 (hbs1l)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132861893 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
FliD_N
Motif
Other DBs
NCBI-GeneID:
132861893
NCBI-ProteinID:
XP_060749531
LinkDB
All DBs
Position
19:4077677..4121387
Genome browser
AA seq
675 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDIYGQSVDDDFCISPATAAQFIYSRQDSRQTRQVEPLEEEE
HEEEEEEMPTSPSVTQTLDPLIQAQLYSCLDQMRTVLGDSVPDSTLREAALKYDCDPQRA
LDSILSAESSSKQTAASKPHPPPQKAKPRELPETRLESEVLPKVARMTVSGKKQTMGFDV
PSSEENGVGPSVRRGLSPETTAGAAPETPSKAACVEAEDCAAPTPPRSTSKNKQQLNIRT
ELEQRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQEAKKAGKASFAY
AWVLDETGEERDRGVTMDVGMTKFETKSKVVTLMDAPGHKDFIPNMITGAAQADVAVLVV
DASRGEFEAGFEAGGQTREHALLVRSLGVTQLAIAVNKMDQVNWQQSRFQEITSKLGQFL
KQAGFKESDVYYVPTSGLSGENLTTRSTEAALTSWYKGPCLLEQIDSFKAPQRSVEKPFR
LCVSDVFKDQGSGFCVTGKIEAGFIQTGERVLVMPPNETCTVKGIALHDEPQDWAAAGDH
VSLTVTGMDIIKINVGCVFCDPKEPIRSCTRFRARILLFNIEVPITQGFPVLLHYQTVIE
PATIRKLVSVLHKTSGEVLKKKPKCLSKGQNAVVEIQTQRPVALELYKDYKELGRFMLRY
VGSTIAAGVITEIKE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccacaggaatgttcgagggtataattacgacgaagattttgaggacgatgac
atttatggacaatctgtggacgatgacttttgcatctcacctgcaacggctgctcagttc
atttactcgcgtcaggactcgcggcagacgcggcaggtagagcccctggaggaggaagaa
catgaggaggaggaggaggagatgccgacctcaccctccgtcacgcagacgctggaccca
ctgattcaagctcagctgtactcgtgtttagatcagatgaggacagtactgggagactct
gttcctgactccacactaagagaagcggccctgaagtacgactgcgatcctcaacgagct
ctcgactccattctgtctgccgaaagcagcagcaagcagacagcagcgtctaaaccccac
cctccaccacagaaagccaaaccccgggagcttcctgagactcgtttggaatctgaggtg
ctccctaaagtggccaggatgaccgtctccgggaagaagcagaccatgggcttcgatgtg
ccgagctcggaggagaacggagtcggtccgtccgtccgcaggggcctgagtccagagacg
acggcgggagcagctccggagactccttctaaagcggcgtgtgtggaggcggaggactgc
gcggccccgactccgcctcgctccaccagcaaaaacaaacagcagcttaacatccgcacc
gagctggagcagaggcagggagggaaaccgctcctcaatctcgtcgtcataggtcatgtg
gatgccggtaagagcacgctcatgggtcatctcctgtacctgctggggaacgtgaataaa
cgcaccatgcacaagtacgagcaggaggccaagaaagccggcaaggcctctttcgcttac
gcctgggtgctggacgagaccggagaagagcgagacagaggcgtgaccatggatgtgggc
atgaccaagtttgagaccaagtccaaagttgtgaccctgatggacgcaccaggacacaaa
gactttattcctaatatgatcaccggagcagctcaggcagatgtagccgtgttggtggtg
gatgctagtcggggagagtttgaggccgggttcgaggccggtggtcagaccagggagcat
gctctcctcgttcgctccctcggcgtcacacagctcgcaatcgctgtgaacaagatggac
caggtgaactggcagcagtcaaggttccaagaaataacttccaaactcggccagtttctc
aagcaagctggtttcaaggaatccgatgtctattacgtccctaccagtggtctgtcagga
gagaatctcaccaccaggagcacagaagcagcgctcacctcctggtacaaaggcccatgt
ctactggaacagatagactcatttaaagctcctcagaggtcagtggagaagcccttcaga
ctctgcgtgtcagacgtctttaaagatcaggggtctggtttctgtgtgacggggaaaatc
gaagctggcttcattcagacaggagagcgagtgctggtcatgccacctaacgagacctgc
actgtgaaaggtatcgctcttcacgacgagccgcaagactgggcggccgccggcgatcac
gtcagtctgacggtcacaggcatggacatcattaagatcaatgtcggctgtgtgttctgt
gaccccaaggagcccatcaggtcctgcactcgtttccgagcaagaatcctgctgtttaac
attgaagtgccaataacacaaggctttcctgtcctgctgcactaccagacagtgattgag
cctgccaccatcagaaagctggtcagtgtgttacacaaaaccagtggtgaagtcctgaaa
aagaaaccaaaatgtttgagtaaaggccagaacgctgtggtggagattcagactcagaga
cctgtggctctggagctctataaggactataaagaactcggacggttcatgctgcgttat
gtgggttccaccatcgctgctggggtcattacagagatcaaagagtaa
DBGET
integrated database retrieval system
