Tachysurus vachellii: 132861917
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Entry
132861917 CDS
T09596
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
tvc
Tachysurus vachellii
Pathway
tvc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
132861917 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132861917 (scn8aa)
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
132861917 (scn8aa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
FraC
ATP-synt_B
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
132861917
NCBI-ProteinID:
XP_060749578
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All DBs
Position
19:5754702..5810059
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AA seq
1958 aa
AA seq
DB search
MAAALFAPPGPDSFRYFSPEALANIERRIAEEKAKPPPKPDSSYRDDDDKDKPRPNTDLE
AGKNLPFIYGDIPSGMVATPLEDIDPFYMNQKTFIVVNKGKTIFRFSATPSLYIISPFNL
LRRIAIKILIHSLFSMIIMCTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESLVKIIAR
GFCIDDFTFLRDPWNWLDFMVISMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPINITELYQANGSEAF
DFDAYIMNDKNFYILPGSLDALLCGNGSDAGRCPEGYTCMKAGRNPNYGYTSFDSFGWAF
LALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TMEEAARKEEEFKAMMEQIRKQQEDAQANAMATSAGTVSEDAAEDDGVENLSCSSSEMSK
LSSKSAKERRNRKKKWKQKEQDREKGDSEKFVKSESDDGSKKRFRFPDNRLGRRSSIMNQ
SLLSIPGSPFLSRHNSKSSIFSFKGRCRDAGSENEFADDEHSTVEECDQRRSSLFSPYRR
SSYSGYHGKHNSTVDCNGVVSLIGPGPGGRLLPEVIIDKAASDDSPTTDIEIKKKLSGSL
MVSMDQLNASFGHKERANSVMSVTNTLVEELEESQRKCPPCWYKFANTFLIWECSPMWLK
VKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMSEQFEHVLTVGNLVFTGIFTAEMV
AKLVAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTL
NMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYRDCVCKISVTCTLPRWHMHD
FFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFS
ADNLAATDDDGEMNNLQISVNRIKKGIAWTKVNVRQLVRAILRRKAVDEAKPLDELYDKK
LNCIANHTDLNRDIDYQKDANGTTSGIGSSVGKYMIDDDHMSFIHNPNLTVCVPIAAGES
DFENLNTEDFSSESEAEGSKDGLDDSSSSEGSTIDIKPEVEEAVVVEALEEYVDPEACWT
EACIARYKCCDVSITEGWGKSWWYLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDVYI
EQRKTIRIILEYADKVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLIAN
TLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFS
IMGVNLFAGKYYYCFNETSEEYFKLHEVNNKTQCFELIYANYSEVRWKNVKINFDNVGAG
YLALLQVATFKGWMDIMYAAVDSRKVGDQPLYEDNIYMYLYFVIFIIFGSFFTLNLFIGV
IIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVFDFVTQQ
VFDISIMILICLNMVTMMVETDDQSPETENILYWVNFIFIVVFTAEFVLKLFALRHYYFT
NGWNIFDCVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLF
ALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKRESGIDDMYNFETFGNSMIILFMIT
TSAGWDGLLAPILNYAPDCDPNKENPGTSVKGDCGNPSVGIFFFVMYIIVSFLIVVNMYI
AIILENFSVATEESADPLCEDDFESFYEIWEKFDPTASQFITFAKLGDFADALEHPLRVP
KPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGDLDMMRQQMEERFIAANPSKIS
FEPITTTLRRKQEHMSASVIQRAYRAYLIRRGFICKRLISSGKLENGGTNQEKKEDTPST
ASLPSYDSVTKPEKDKQDESESKGKNDKNQKDVKESKC
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagccctttttgcaccgccaggacctgacagcttcagatactttagcccggag
gctctggctaacattgagaggcgtatcgctgaggaaaaagccaagcctccacccaagcca
gacagcagttatcgtgatgatgatgacaaggacaagcccagacccaacactgacctggaa
gcgggcaaaaacctgcccttcatctacggcgacattccttctggaatggtggcgacacca
ctggaggacatcgatcctttctacatgaatcagaaaacatttatagtggtaaacaaaggg
aaaacaatcttccgctttagtgccacaccttccttgtacattataagcccttttaatctt
cttaggcgaatagctattaaaattttgatacattcattattcagcatgatcatcatgtgt
accattctgaccaactgtgtgttcatgacgtttagtaatcctccagaatggtccaaacaa
gtagagtacacgttcacaggaatttatacgttcgaatcactcgtcaaaatcatcgcccgc
ggcttctgtatagacgacttcacattcctgagagacccatggaactggctggatttcatg
gtcatctcgatggcgtatataacagagtttgtaaacctaggcaatgtctcagctctgcgc
acattcagagttctgagggcattgaaaactatttctgtaataccaggtctaaagaccatt
gttggcgccttgatccagtcagtgaagaagctctcggatgtgatgatcctcacagtgttc
tgtctcagcgtctttgccctcatcggcctgcagctcttcatggggaacctgcggcacaag
tgtgtcatctggcccatcaacatcactgagttataccaggccaatggcagtgaagccttc
gacttcgacgcgtacatcatgaatgataaaaatttctacatactccctggcagcctggac
gctctgttatgtgggaatggctctgatgctggacgctgtcctgaaggctacacatgtatg
aaggctggacgcaatccaaactacggctacaccagctttgacagcttcggctgggcattt
cttgctcttttccgtctcatgactcaggacttttgggagaacttgtacatgctgactctc
cgagcagcagggaagacctacatgatcttttttgtgctggtgatctttgtgggctcattc
taccttgtcaatctcatcctggctgtggtggccatggcatatgaagagcagaaccaggcc
accatggaggaagcagctaggaaagaggaggaattcaaagccatgatggaacagattagg
aaacagcaagaggatgcccaggcaaacgccatggccacatcagcaggtacggtgtcggag
gatgcagcggaggatgatggagtggagaacctgtcgtgtagctcctctgagatgtccaaa
ctcagttctaagagtgccaaggaacgcaggaaccgcaagaagaagtggaagcagaaggag
caggacagggaaaaaggggacagtgagaagtttgttaaatctgaatcagacgatggcagc
aagaagaggttccgtttccccgataaccgcttaggccgcaggtcctccatcatgaaccag
tctctcctcagcatccctggctcacccttcttatcacgccacaacagcaagagcagcatc
ttcagcttcaaaggccgttgccgggacgcaggctctgagaacgagtttgcggatgatgaa
cacagtacggtggaggagtgcgatcagagacgtagctcactgtttagcccgtaccgccgc
agcagctacagcggctaccacggaaaacacaacagcacggtggactgcaatggggtcgtg
tcactaatcgggcctggtcctggaggacgcctactgcctgaggtgataatagataaggca
gcttctgacgacagcccaacaactgacattgagatcaagaagaaactctcaggctcttta
atggtttctatggaccaactcaatgcttcttttgggcacaaagagcgagcgaacagcgtc
atgagtgtcaccaatacattagtagaggaactggaggaatcgcagagaaagtgcccacca
tgctggtacaagttcgctaacaccttccttatctgggaatgcagccccatgtggctgaag
gtcaaggaaattgtcaacctgatcgtgatggacccctttgtagacttggctattactata
tgcatcgttctcaacacactgttcatggccatggagcactacccgatgtcggaacaattc
gagcacgtcttgactgtgggcaacctggtattcactggaatattcactgctgaaatggtg
gccaaactggttgcaatggatccgtactactactttcaggagggctggaacatctttgac
gggtttatcgtgagcctgagcttgatggaacttggactggctaatgtggaaggcttgtct
gtgctcagatcatttagattgctgcgagtgtttaagctggctaagtcatggccaactttg
aacatgctgataaagatcattgggaactcagtgggcgctcttgggaacctgactctggtc
ctggccatcattgtgttcatctttgccgtggtgggcatgcagctgtttgggaagaactac
cgggactgcgtgtgtaagattagtgtaacctgtacgctgcctcgttggcacatgcacgac
ttcttccactcgttcctgatcgtgttccgtgtgctgtgtggggagtggatcgagacaatg
tgggactgcatggaggtggcgggtcaggccatgtgtctcatcgtgtttatgatggttatg
gtcatcggaaacttagtggtgctgaatctgttccttgccttgctgctgagctcattcagt
gcagacaacctggcagccacggacgatgacggagagatgaacaacctgcagatctctgtt
aaccgtatcaagaaaggtatagcgtggacaaaagtcaatgttcggcagttagtgcgagct
atcctccgaaggaaggcggtggatgaggccaagcctctggatgagctctacgacaagaaa
ctgaactgcattgctaaccatacggacctcaaccgtgatatagactaccagaaagatgcc
aatggtaccaccagcggcattggcagcagtgtgggcaagtacatgattgatgatgaccac
atgtccttcatccacaaccccaatctgaccgtgtgtgtgcccatcgcggcaggagagtct
gactttgaaaacctgaacacagaggacttcagcagcgagtcagaggctgagggcagcaaa
gacgggctggatgacagcagctcgtcagaaggcagcactatagatattaagccggaggtg
gaggaggccgtggtggtggaggcgttagaggagtatgtcgacccagaggcatgctggact
gaagcttgtatcgcacgctacaagtgctgtgatgtgtccatcactgagggctggggaaag
agctggtggtacctccgcaagacctgctatcttattgtggagcacaactggtttgaaact
ctcatcatcttcatgattctgctgagtagtggagccttggcttttgaagacgtatacatc
gagcagaggaagactattcggatcatcttggagtatgccgacaaggtgttcacctacatt
ttcatcctggagatgctgctaaaatgggtggcctacggttttgtgaagtatttcactaac
gcctggtgctggctggacttcttcattgtggatgtgtctatagtcagccttatagctaat
acgctgggctactccgatctagggcccattaaatcactcaggacactcagggccctgaga
ccactcagagcattgtcccgttttgaagggatgagggttgtagtcaacgccttggtgggt
gccatcccttccattatgaatgtgttgctggtttgcctcatcttttggctgattttcagt
atcatgggtgtcaacctatttgcggggaagtattactactgcttcaatgaaacttctgag
gaatactttaaactgcacgaggtgaacaacaagacacagtgctttgaactcatctatgcg
aactacagcgaagtgcgctggaaaaacgtcaagatcaattttgacaacgtgggtgccggc
tatctggctctgctccaagtggctactttcaaaggctggatggacattatgtatgcagcg
gttgattcacgaaaggtgggagaccagcccttgtatgaggacaacatctatatgtacctt
tactttgtcatctttattatttttggctcgtttttcactctcaacctgttcattggtgtc
atcatcgacaatttcaaccagcaaaagaaaaagtttggaggtcaggatattttcatgaca
gaagaacagaagaaatactacaatgcaatgaagaaacttggttcaaagaaaccacaaaaa
cccatacctagacctcagaacaagatccagggaatggtgtttgactttgtgacgcagcaa
gtgtttgacatctctatcatgatcctcatctgtctaaacatggtgaccatgatggtggaa
acagatgatcagtcgccggagacagaaaacatattgtactgggtgaacttcatcttcatt
gtggtcttcaccgctgaattcgtcctcaagctctttgccctgcgtcattactatttcacc
aatggctggaatatctttgactgtgttgtggtcatcctttctatagttggtatgttcctg
gcagacttgattgagaagtactttgtgtcaccgacactgtttagggttattcgtttggct
cgaattggtcgtatcctgcgtctgatcaaaggcgccaaaggcatccggactttactgttt
gccttaatgatgtcactgccagctctgttcaacatcggcttgctgctcttcctggtcatg
ttcattttctccatcttcggcatgtctaactttgcctatgtcaaacgggaatctggaatc
gatgacatgtacaattttgagacatttggaaacagcatgattattttgtttatgatcacc
acctcagcagggtgggacggcctactggctcccatcctcaactacgctccagactgtgat
cctaataaggagaaccctggtacctctgtaaagggtgactgtggcaatccttctgtgggc
attttcttctttgtcatgtacatcattgtgtctttcttgatcgtggtaaatatgtacatc
gccattatcctggaaaactttagcgtggctacagaagagagtgctgatccgctgtgcgaa
gatgactttgagtccttctatgagatctgggagaagtttgatcctactgcttcgcagttt
atcacctttgccaagctcggtgactttgctgatgctctcgagcaccccctacgggtgcct
aagcccaacacgatagaactcattgccatggacctgcccatggtgagtggagaccgaatt
cactgcctggatatcctgtttgcctttaccaaacgtgttctgggtgacagtggtgacctg
gacatgatgcggcagcagatggaggagcgcttcattgcagccaatccctccaagatatct
tttgagcccatcaccacgacgttgcggcgcaagcaggagcacatgtccgcttcggtcatc
cagcgtgcttaccgtgcctacctaatacgcagaggcttcatttgcaagcgacttataagc
agtggcaagctggaaaatggaggcaccaaccaggagaagaaggaggacacaccctccact
gcctcactgccctcctacgacagcgtgaccaaacctgagaaagacaaacaggatgaaagc
gaaagcaaaggcaagaacgacaaaaaccaaaaagacgtcaaggaatcaaagtgttag
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integrated database retrieval system
