KEGG   Tachysurus vachellii: 132862205
Entry
132862205         CDS       T09596                                 
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
tvc  Tachysurus vachellii
Pathway
tvc04510  Focal adhesion
tvc04512  ECM-receptor interaction
tvc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    132862205 (col9a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    132862205 (col9a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    132862205 (col9a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tvc00535]
    132862205 (col9a3)
Proteoglycans [BR:tvc00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   132862205 (col9a3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 132862205
NCBI-ProteinID: XP_060750104
LinkDB
Position
19:complement(1808569..1837466)
AA seq 679 aa
MAMFSALGFLLLCQLLASSLAQPQLPPPDSRGPPGPPGLPGKDGTDGKPGPAGLPGKPGP
KGKAGIPGIAGTPGLSGLPGIDGLPGPDGPQGKDGPPGPRGDAGPPGPPGPPGRGRPGAP
GLPGANGLPGGVGPQGPPGPEGLPGLPGLPGPDGPPGLPGALPEGNGDALCPAICPPGPP
GPPGMPGFKGHTGHKGDKGEPGKDGEKGEQGPPGPSGIPGTVGLQGPRGLRGLTGPVGVV
GDRGLPGFRGKPGIPGVVGKTGDAGEKGPVGFKGPKGEIGKIGPKGLPGHLGPKGEPGMP
GRDGKDGAQGYDGEKGDAGKPGVSGEKGPNGLPGLPGKAGVKGARGVVGDQGKTGEEGPA
GEPGIPGEIGIPGERGEAGPRGIAGGIGLIGNPGPQGVKGFQGIKGALGDPGLPGPTGLR
GDFGDRGPTGASGPKGEIGMAGSDGLPGENGEAGPFGPPGQKGEPGKTGELGPKGVTGPQ
GETGPRGLPGKPGQMGFHGEPGPPGVAGKTGVPGKLASEQHIRELCGGMIDDQIAQLAAH
LRRPLSPGAVGRPGPAGPPGQQGEPGSMGLPGSRGPPGYRGLPGDLGDPGPRGDAGEQGD
KGTVGKAIDGPVGDQGEPGLQGVHGFVKDGRDGAPGDPGEPGEPGRAGSTGHQGPPGICD
TTACQGAAPHGKSSNPKNH
NT seq 2040 nt   +upstreamnt  +downstreamnt
atggccatgttctcagctctgggctttcttcttctctgccagcttttggcatcatccctc
gctcagccacaattaccgccacctgattctcgtgggccaccaggaccaccaggactcccg
ggcaaagatggcaccgatggaaaaccaggaccggccggacttcctggtaaacctggacct
aaagggaaagctggaattccaggaatcgcaggaacacctggactttctggacttcctgga
atagacggtctaccgggtcctgatgggcctcaggggaaggacggacctccaggaccaagg
ggcgacgcaggacctcctggaccacctggacctcctggcagagggagacctggagctcct
gggctgcctggagctaatggactgcctggtggtgtaggacctcagggacctccaggacca
gaaggacttccaggacttccaggtcttccaggtccagatgggccacctggtttacctgga
gcgcttcccgagggaaatggtgatgcactgtgtcctgctatctgtccaccaggacccccg
gggcctcctggaatgcccggtttcaagggacacacaggacacaaaggagacaaaggagag
ccagggaaagatggagagaagggtgaacaagggccacctgggccttctggaatcccagga
actgttggtctacagggacctcgaggtttgagaggacttacaggtccagtgggagtcgtc
ggagacagaggtttgccaggtttccggggcaagcccggtattcctggtgtcgtcggaaaa
acaggtgacgccggagagaaaggacccgtgggttttaaaggacctaagggagaaattggt
aaaataggccctaaaggtctgcctggacatctgggccctaaaggagaacctgggatgcca
ggcagagatggtaaagatggcgctcagggatacgacggtgaaaaaggtgatgcagggaag
ccgggagtttcaggagagaaaggacccaatggtttacctggtttgccaggaaaagctgga
gtaaaaggtgccagaggagttgttggtgatcaaggaaagacgggagaagaaggaccagcc
ggagagccaggtattcctggtgagattggcattccaggagaaagaggtgaagcaggaccc
agaggcatcgctggaggcattggattaattggaaatcctggacctcagggagtcaaagga
ttccagggaattaaaggtgctcttggagatcctggtcttccgggtccaactggactgaga
ggggactttggagaccgaggaccaacaggggcttcaggaccgaaaggcgagattggaatg
gctggaagtgacggcttgcctggagagaacggagaagcaggtccattcggtccacctggc
caaaaaggagaacctgggaagactggtgagctgggtcctaaaggagtaacaggaccacag
ggagagaccggaccaagagggctacctgggaaacctggtcagatgggtttccatggagaa
ccgggtcctcctggtgtcgctggaaagactggtgttcctggaaaactggcaagtgaacag
catatcagagaactctgtggtggcatgattgatgaccagattgctcagctggctgctcac
ctgaggagaccattatctccaggagctgtgggtcgaccgggtccggccggacctcctgga
caacaaggagaaccaggatcgatgggacttcctggatctcgcggtcccccaggatacaga
ggacttccaggagatcttggagaccctggtcctagaggtgatgccggtgaacagggtgat
aagggaaccgttggaaaagccatcgatggcccagttggagaccaaggagaaccgggtctc
caaggagtacacggctttgttaaagacggacgtgatggtgcacctggagatccaggtgag
cctggggaacctggcagggcaggaagtacagggcatcaaggacccccgggaatctgcgac
acaacagcgtgtcagggcgcggcgcctcatgggaaatcatccaaccctaaaaaccattaa

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