Tachysurus vachellii: 132862480
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Entry
132862480 CDS
T09596
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132862480 (dhx35)
Enzymes [BR:
tvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132862480 (dhx35)
Spliceosome [BR:
tvc03041
]
Complex C
Other components
Complex C specific factors
132862480 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
ABC_tran
AAA_22
FtsK_SpoIIIE
nSTAND3
Cas3-like_C_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
132862480
NCBI-ProteinID:
XP_060750504
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All DBs
Position
19:complement(1424754..1444873)
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AA seq
699 aa
AA seq
DB search
MAAPKSAMKFWKPGAEAPGVCEERELNSEPSGTAIIYNPYGALSVEKQRQKLPVFKHRNN
ILYMLESFQTVVILGETGSGKSTQVPQYLLEAGWAAEGKVIGVTQPRRVAATSVAARVAE
ERGAFLGHEVGYTIRFDDCSDPQATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQRKRGDLRLIVASATLDAKKFQDFFNLNESGDPSKDTCGILSVEGRT
FPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSMLQDQARSLS
RHGLKKHLRVLPMYAGLPYSEQLKVFERLPPTVRKVVVATNIAETSITINGIVFVIDCAF
VKLRCYNPLTAIESLVVTPISKASASQRAGRGGRNRPGKCFRLYTEEDFEKLPESTVPEM
QRSNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLFALGGLDQYGRLTEPAGVR
MAEFPLSPMFAKMLLESGNFGCSKEIISIAAMMQIQNVFVVPSNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFVKHQKSSQWCQEHFLNYKGLLRAMTVREQLRRLLNKFKVPRTSSEGD
PDVILRCIVSGFFANAARLHHSGSYRTLRDDRELHIHPNSVLYGEKPPKWVVFNEVIQTS
RYYMRDVTAVESSWLVELAPHFYKQAAHGSLGSKRSKVF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccaaatccgccatgaaattctggaaacccggggccgaggcaccgggagtg
tgtgaggagagggagctgaacagcgagccgagtggcaccgctatcatctacaacccttat
ggtgccctgtctgtggagaaacagaggcagaagctgcccgtctttaagcacaggaacaac
atcctgtacatgttggaaagctttcagaccgtcgtgatcctgggtgagaccggctcgggg
aagagcacccaggttcctcagtacctcctggaggccgggtgggctgcagaggggaaggta
attggcgtgactcagcctcggagagtagctgcgacgtcggtggccgctcgggtcgcagaa
gaacgtggagcgtttttgggtcatgaggtgggatacaccatccgctttgacgactgctct
gaccctcaggccacccgtataaagttcctgacagacgggatgttggtcagggagatgatg
gctgaccctctgctgaaaaagtacagtgttctcatgttagacgaggcccatgagaggact
ctctacactgacattgccatcggccttctcaagaagattcagaggaagaggggagacctg
agactaatcgttgcttccgctacactggatgccaagaaatttcaggacttttttaatctg
aatgaatctggagacccgagcaaggacacgtgtgggatcctgagcgtcgagggtcgcact
ttccctgtggatgtgttttatacagtcagtccagttccagattatgtaaaggccacagtg
gaaaccgttctaaagatacacgaaaccgaggatgacggagatgttctagcgttcctcact
ggacaggaggaggtggagaaggtggtgtccatgctccaggatcaggctcgctctctgtct
cgtcacggcttgaagaaacatctgcgtgtcctgcccatgtacgcaggcctgccttactct
gagcagctgaaggtgtttgagaggctgccacctactgtccgaaaggtggtggttgccacg
aacatcgccgagacgtccatcaccatcaacggcatcgtgtttgtgatcgactgtgcgttc
gtcaagctgcggtgctacaaccctctcacggccatcgagtctctggtggtgacgccgatc
tccaaagcctcagcgtcccagagagcaggaagaggaggacgcaaccggcccgggaaatgt
ttccgtctttacacggaggaagacttcgagaagcttccggagagcaccgtgcctgagatg
cagcgcagtaatctggcgccggtcatcctacagctcaaagcgctgggcatcgacaacgtc
ctgcgcttcagcttcctgtctccgcccccggctcagaccatggtgcaggcgttagagctg
ctcttcgctctcggtggtctggatcagtacgggcgtctgacggagccggcgggggtccgc
atggccgagttccccctcagccccatgtttgctaagatgcttctcgagtcgggaaacttc
ggctgctccaaagagatcatcagcattgccgccatgatgcagatccagaacgtgttcgtg
gtgccgtccaatcaaaagaaagcggccgcgcgtgagcacaggaagtttgccgtggctgaa
ggcgatcatctgaccatgctgaatgtctacgaggcgtttgtgaagcatcagaagagttct
cagtggtgtcaggagcacttcctgaactataaaggtctcctgcgtgccatgacggtccga
gagcagctccgtcgcctgctgaacaagttcaaggttcctcgaacctccagcgaaggagac
cccgatgtcatcctgaggtgcatcgtgtcaggattctttgctaacgcggctcgcttgcat
cactccggatcttacaggactttacgggacgaccgggagcttcacattcatcccaactct
gtgctttatggggagaaacctccgaaatgggtggtctttaacgaggtgattcagacctcc
aggtactacatgcgagatgtgactgcggtggaatcgtcctggctggtggaactggcacct
catttttataaacaggccgcgcacggctctctgggaagcaagaggtccaaagtcttctga
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