Tachysurus vachellii: 132862904
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Entry
132862904 CDS
T09596
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132862904
Cell adhesion molecules [BR:
tvc04515
]
Cadherins
Protocadherins
132862904
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Fibulin_C
7TM_GPCR_Sri
Motif
Other DBs
NCBI-GeneID:
132862904
NCBI-ProteinID:
XP_060751283
LinkDB
All DBs
Position
20:complement(1220737..1223248)
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AA seq
818 aa
AA seq
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MVYVRSCAASRHRRMSKTQLKWQTVFFIFCVYGMDFGFCQARYSIPEEAPEGSFVGNIAN
DLGIEISRLISGKARVVTKGGRQYVELSRDKGTLVVKERIDREELCKQTTPCSFSFDLIM
ENPIELHRVTVEVQDINDNAPKFPKGTVSLQISENTETGTRFPLYRAVDLDVGVNGIEKY
SLSRTDYLKLEINDESDGTKHVEMVLHRELDREEQNELNLVLTAYDGGSPKKSGTMQIHI
SVLDANDNKPVCQQSVYKAEVKENLAAGTVVTAVSATDADEGINGLVSYAIAQASEEVGN
IFQIHSSTGHISTLRGLDFETEKNYQINVKAMDKWGLADTCKVVVNVIDENDNAPSIQLM
SFSNIIAENSPVGTTVAVINVEDVDSGQNGLVQCKINENVPFKIESSLSDYYVIITDETL
DRENIAEYNITILVSDQGSPARYSNKTLNVKISDVNDNPPVFSSEEYKTTVIENNSPGVA
VLTVKASDADWGPNARLSYFLGNNNIQGNPVSSLFSVNAESGVIHALKAYDYEQMKSFSF
NVTARDGGSPPLSSEVTVTINVQDQNDNAPQVLYPVQTGGSVVAEIVPRSADVGYLVTKV
VAVDVDSGQNAWLSYKLQKATDRALFEVGAQNGEIRTVRQVTDKDAVKQKLTVVVEDNGQ
PSRSAVVNINVAVADTFPEVLSEFTDFTQHKQYNDDLTFYLVLALAAVSFLFITTVVVII
SVKIYRWRQSRIFYQSNLPVIPYYPPGYTDTGVTGTLPHMYNYHACMTTDSRKSDCKYST
LGGQNVLVMDRSFTETMQRAMREKEFQQDLESPEVVRK
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggtttatgtgcgctcgtgtgctgcttctcggcatcgtcggatgtctaaaacgcagcta
aaatggcagaccgtgttttttattttctgtgtgtacgggatggacttcggcttttgtcaa
gcgcgatattcaatcccggaggaagctccagaaggatcatttgtaggcaatatcgcaaac
gatttgggaatagagattagtagacttatttctggaaaagctcgggttgtaacaaagggc
ggccggcaatatgtcgaactgagcagagacaaaggcaccctcgtagtgaaggagaggata
gaccgagaggagctctgcaagcaaacaacgccctgcagcttcagctttgatctgatcatg
gaaaatcccatagaactgcatcgggtcactgtggaggttcaggatataaatgacaatgca
ccaaaatttcctaaaggtaccgtcagtttacaaattagcgagaacacagaaactgggact
cgctttccattatacagagctgtagatttggacgtaggtgtaaatggtattgaaaaatat
tctcttagtcgtaccgattatttaaagctggaaataaatgatgagagtgatggaactaaa
catgtagaaatggttctccatcgagaattagacagagaagaacaaaatgagcttaattta
gtcctgactgcgtatgacggaggatcacccaaaaaatcaggcacaatgcaaattcatatt
tctgttttagatgcgaatgataataaacccgtttgtcaacaatcagtttataaagccgaa
gttaaggaaaatcttgcagctggtaccgtagtaacagcagtaagtgcaactgatgctgat
gaaggaataaatggtctggtatcatatgctattgctcaagctagtgaagaagtcggaaac
atttttcaaatacattcgtcaaccggacatattagtacactacggggattagacttcgag
acagagaaaaattatcaaataaatgttaaagcgatggataaatggggcttggcagatacc
tgcaaagtggttgtaaatgtcattgatgaaaatgataacgctccgtccatacagcttatg
tcattttcgaatataattgcagaaaattctccagtcggaacaaccgtggctgttattaat
gtggaagatgtagattccggtcaaaatgggcttgtgcagtgtaaaataaatgaaaacgtg
ccgtttaaaatagaatcgtctctttctgattactatgtaataattactgatgaaactctc
gatcgagaaaacattgctgaatacaacatcaccattctggtgtccgatcaaggaagtcct
gcacgatacagtaacaaaaccctaaatgttaagatttcagacgtgaatgataacccaccc
gtattcagttctgaagaatataaaacaaccgttattgaaaacaactctccgggtgtggct
gtgctcacggtaaaagcgagcgatgctgattggggtccaaatgcgcgactttcttatttt
ttggggaataataatatacagggcaacccagtgagttctttattctcagtaaatgcagag
agcggggttatacatgcactcaaagcctatgattacgagcaaatgaaaagtttcagcttt
aacgtgacagcccgagacggagggtcgcctcctttaagttctgaagtcacagtgacaatc
aacgttcaagatcagaacgacaacgctcctcaggtcctctacccagtacagaccggtggc
tctgtggtggctgagattgtgcctcgttcagcagatgtgggttatctggtcactaaagtg
gtggctgttgatgtggactccggacagaacgcctggctctcctacaaactccagaaagcc
acagacagggcgctgtttgaagtgggagcgcagaatggagagatacgaactgtgcgtcag
gtcaccgataaagatgccgtgaaacaaaagctcactgtagttgtggaggataacggacag
ccgtctcgctcagctgtagttaacatcaatgtagctgtagcggacactttccctgaagtg
ctctcagagttcacagactttacgcaacacaaacaatataatgacgacctcaccttttat
ttagtgttagcattagctgctgtttctttccttttcatcacgactgtagtagttataatc
tcagtaaagatctacaggtggagacaatcgcgcatcttctatcagtctaatctcccagtt
attccgtactatccacccggttacacagacacaggtgttactggaactctgccgcacatg
tataattatcatgcttgtatgacgactgactcgaggaagagtgactgtaaatattctaca
ctcggaggacagaatgttttagtcatggaccgcagttttacagaaactatgcaacgagca
atgagagaaaaagaattccagcaggacctagagtcaccggaggtggtaaggaagtaa
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