Tachysurus vachellii: 132862943
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Entry
132862943 CDS
T09596
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132862943 (sbno1)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132862943 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
132862943
NCBI-ProteinID:
XP_060751356
LinkDB
All DBs
Position
20:5171794..5185892
Genome browser
AA seq
1407 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDLFDIDSQDTAQSPASQQSVSKNVLDIGLGSEAAGIVGIE
PAVPPTPTVTIRQKPQPSTTTFVLNQLNQLPSLGTIVVTKPSVGTSSRQTITVTKVVQTS
AAAAQRSSSSSSTTATVCSVVPSTREQIKLKDLLRTSGAKTNSLGELMKLKPPPDIAQPV
ATATGTKIILLSTKLMNKPVEVNNGVKKEVSSKDVARIWANEEIKMRSFSPVNKLPGMKE
EEEPEEEEEEELGHAETYAEYMPMKLKIGERHPDPVVETSSLSSVSPPNVWYRLSIPEET
IDRGWLSALQLEAITYACQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRK
RSLWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSL
IGESQTGGKYKTRFKQLLHWCGDDFDGVIIFDECHKAKNVCPIGSSKPTKTGLAVLELQN
KLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFKEFSNFIQAVERRGVGAMEIVAMD
MKLRGMYIARQLSFQGVTFKIEEVPLTNNYIKMYNKSVRLWVSAREKFQQAANLMDAEQR
MKKSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALE
EGGGELNDFVSTAKGVLQSLVEKHFPAPDRQKLFSLLGIDLSAKKTPSPAETKEEQKGKK
RKGAEVKKGAKKSRKSGGLSGSSSDESNSEVSDKDDSDDSFNSVSSGDEDEDDFNPFKDD
SSEDDEDDPWLIRKDSKKSKEKKNKKKKKSIDPDSIHSALLASGLGSTRPAFTTPVVKPT
SNNIVAPAKSEPEESSCVTSNDAVEDAQQMKRELLEQLEKLAEDLPPNTLDELIDELGGP
ENVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNISIISEAASS
GISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQR
FASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDAPLVSPP
SYFEGDFFKEIRNGLIGVGLINVEDRSGVLSLDKDYNNIGKFLNRILGMEVQQQNALFQY
FSDTLNAVIQNAKKNGRYDMGILDLGSGDEKVKKIDAKKFLTPGYSTSGHVELYTVSVER
GMSWEDATHIWAEQSGPDDGFYVQVRNNKKIAIMVKEVNTKKRLFMVYRPNTGKQLKLET
HTDIRKRCKKVLSDEAKQCWVDQYKSSADVCSHAYWRGNCKKTSVGLQCEIGLRCRTYYV
LCGSVLSVWTKVEGVLASVSGSNMKMQIVRLRTEDGQRIVGLIIPANCVAPLTNILSTSD
QSQQLAVQQQQMWQQLHPQSLSHSFNT
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggatccaggacaagatttgcttcttgcagccctgagcgaaagtggaatctgcccaaat
gacctttttgacattgattctcaggacactgctcagtcccctgcctctcaacagtcagtt
tcaaagaatgtccttgacattggtcttggtagtgaagcagctggaattgttggaattgaa
cctgctgtgccacccacacctacagtcacaatccgacagaagcctcagccctcaaccacc
acattcgtcttaaatcaactgaatcaactgccatcactagggaccatcgtggtcacaaaa
ccctcagtggggacctcctccagacagaccatcacagtaaccaaggtggttcagacatca
gcagcagcagctcagcgaagctcgtcatcgtcctccactactgctaccgtttgcagtgtg
gtcccatcgactcgtgagcagattaagctgaaagaccttctccggactagcggtgcgaag
acaaacagcctcggtgaacttatgaagctgaagcctccacccgatattgcgcagcctgtt
gctacagccacaggcacgaagattattttgctctccacaaagttgatgaataaaccagtg
gaggtaaacaatggtgtgaagaaagaggtgtcgagcaaagacgtcgccagaatctgggcc
aatgaagaaatcaaaatgcggagcttctcccctgtaaataagttacctggaatgaaggag
gaggaggagcctgaggaagaagaggaggaggagttgggtcacgcagaaacgtatgctgaa
tacatgccaatgaaattgaaaatcggagagcgacatcccgatcctgtggtagagaccagc
tccctctcaagtgtcagccctcctaacgtgtggtacagactttccattccagaggagaca
atcgacagaggctggctatctgctcttcagcttgaagccattacatatgcttgtcagcaa
catgagacattccttccaaatggagacagagcagcttacctgatcggtgatggtgctgga
gttggaaagggaagaactattgctggaatcatatatgaaaattaccttctgggcaggaaa
aggtccctctggtttagtgtctcgaatgacttgaagtacgatgccgagagggacttgaga
gatatcggtgcaaagaacatccaggtccattctttaaacaagttcaaatatggaaaaatc
tcctcaaaacacaacgggagcgtgaagaaaggtgtgatctttgctacctattcgtccctg
attggagaaagccaaaccggtggaaagtataagacaagattcaaacaattactccactgg
tgtggggatgattttgatggtgtgataatatttgacgaatgtcacaaagccaaaaatgtt
tgcccaattgggtcttcgaaacccacaaagactggactggctgttctcgagctccagaac
aaactaccaaaagcgcgtgtggtctatgccagcgctacaggagcttctgagcctcggaac
atggcttacatgaatcgtcttgggatctggggggaaggaacgccttttaaagaattttca
aattttattcaagctgttgaaagaagaggtgttggtgccatggaaattgttgccatggat
atgaagttgagaggaatgtacattgctcggcagctgagtttccagggtgtgacattcaag
attgaagaagttcctctgacaaacaactacatcaaaatgtataacaagtctgtccgcctg
tgggtgagcgcacgggagaaattccaacaagcagctaacttgatggacgccgaacagcgc
atgaaaaagtcaatgtggggacaattctggtccgcgcaccagaggttctttaagtacctg
tgtatcgcttcaaaggtgcgccgagtggtgcagcttgcgcgagaggaagttaagaatgga
aagtgtgtggtcattggcctgcagtcaactggtgaagctcgaacacttgaggccttggag
gaaggtggaggcgaactcaatgattttgtctctactgcaaagggtgtcctgcagtcactg
gtggagaagcacttccctgctccagacagacagaagctcttcagcttgctgggtattgat
ctatcagcaaagaaaacaccttcaccagcagaaaccaaggaggagcagaagggaaaaaag
agaaaaggtgcagaagttaaaaaaggagcaaagaagtcccggaaatctggagggctttca
ggcagcagttcggatgagagcaattcagaagtctcggacaaagacgacagcgacgatagc
tttaactccgtcagctcaggagatgaggacgaagatgatttcaaccccttcaaggatgat
tctagtgaggatgatgaagatgatccttggctaatccgtaaagactctaaaaagagcaag
gaaaagaagaacaagaagaagaaaaaaagcatagacccagattccattcatagtgccttg
ttagcctctgggcttggttcgaccaggcctgctttcacaacacctgttgtaaaacccaca
tcaaacaacattgttgctcctgctaaaagtgagcctgaagaaagtagctgtgtgaccagt
aatgatgcagtggaggatgctcagcagatgaagagggagctgttagaacagctggagaaa
ctggctgaggatctgccaccaaacacactagatgagcttattgatgagctgggaggccct
gaaaatgtggcagagatgactggtcgcaaaggcagagtagtcagcaacgatgatggcagc
atctcctacgaatcaagatcagaactggacgttcctgtagaaatcctgaacctcaccgag
aagcagaggttcatggatggagagaagaacatttctataatctccgaagcagctagctct
ggtatttcgctgcaagcagaccgtcgagtgaagaaccagaggagaagggtgcacatgact
ttagagctgccatggagtgcagaccgggctattcagcaattcggcagaacacacagatct
aaccaggtcactgctcccgagtacgtgttcctgatatccgaacttgctggagaacaaaga
tttgcctccattgttgccaaaagactagagagcttgggtgctttaacacatggagaccga
agagcaaccgaaacaagggacctcagtcgattcaactttgacaacaaatatggcagaaac
gctcttgagattgttatgaagtccattgtcaatttggatgcacccttggtctctccaccg
tcttatttcgaaggggatttctttaaagaaatccgcaatggtttaattggtgtcgggctg
attaatgtggaggataggtctggtgttctttcattggataaggactacaacaacatcgga
aaattcttaaaccggatccttggcatggaggtccagcagcagaatgccctcttccagtat
ttctctgacacgttgaatgctgtcattcagaatgctaaaaagaatgggagatacgacatg
ggaattctggatttgggctctggggatgagaaggttaaaaagatcgacgcgaaaaaattc
ttgacgccaggttactccacatcaggccacgttgaactttatacagttagtgtggagagg
ggtatgtcatgggaggatgctacacacatctgggcagaacagagcggaccagacgatggc
ttctacgtgcaggtacggaataacaagaaaatagctatcatggtcaaagaagtcaacacc
aaaaagagactcttcatggtctacagaccaaatacaggaaaacagctcaaactggagacg
cacacagatatacgcaagcgatgcaaaaaggttctttcagatgaggctaagcaatgctgg
gtcgatcagtacaaatcttcagcggatgtttgctctcatgcctattggcgagggaactgt
aagaagacatcagtggggctgcagtgtgaaatagggttgcgttgccggacgtactacgtc
ctatgtggctccgtcctcagtgtgtggaccaaagtagagggtgtcttagcctctgtcagc
ggaagcaacatgaagatgcagattgtccgtttgagaactgaggatggacagcgaatagta
ggtctgatcattccagcaaactgcgtggctcccctcaccaacatcctgtctacatcagac
caatcgcagcagctggctgtgcagcagcagcagatgtggcagcagctgcacccacagagt
ctcagccactcgttcaacacatag
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