Tachysurus vachellii: 132863053
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Entry
132863053 CDS
T09596
Symbol
msi2a
Name
(RefSeq) RNA-binding protein Musashi homolog 2a isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
tvc
Tachysurus vachellii
Pathway
tvc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132863053 (msi2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132863053 (msi2a)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132863053 (msi2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
PHM7_cyt
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
132863053
NCBI-ProteinID:
XP_060751590
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All DBs
Position
20:2817344..3029986
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AA seq
406 aa
AA seq
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MDGDGSQATSGSPSDTQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVDDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPAAAYGPVAAAVAAARGSGRGARGRGSYVAYPQNPGPGFPDYGFYSAPSDQRGAPC
SFADYGSLGPQAAQMLQSEHATSACNSPLQHLHSPDQFKSPGANPARPGAFPGANSPGPV
ADLYGPTSQESAVGNYISAASPQPGSGFSHGIAGPLIATAFTNGYH
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggatggagacgggagccaagccacgtccggaagcccgagcgacacgcagcatgacccg
ggcaaaatgtttatcggtggcctgagctggcagacctcaccagacagccttagagactat
ttcagcaaatttggagagatcagagaatgcatggtgatgagagaccccacaaccaaacgc
tcaagaggctttgggtttgttacgttcgctgacgctgccagtgtagataaagtcctagct
cagccgcaccacgaattggactcaaagacgatcgaccctaaagtggccttccctcgccgc
gctcagcctaagatggtcacaagaacgaagaaaatatttgttggaggtctgtcagcgaac
acggtggtggacgacgtgaagcagtatttcgagcagttcgggaaggtagaagacgctatg
ctaatgtttgataagaccactaacagacacagaggctttggcttcgtaacttttgagaac
gaagacgtcgtagagaaagtctgtgaaattcatttccatgaaatcaataataaaatggta
gaatgtaagaaggcccagcccaaagaggtgatgttccccccgggcacgcggggcagggcc
aggggtctgccctacaccatggacgccttcatgctgggaatgggcatgctgagttaccca
aacatcgtggccacgtatgggcgcggatacactggatttgctccgagttatagctaccag
tttccaggtttcccggcagcggcgtacggtccggtggcagcggcagtggcagcggcacga
ggctcaggtaggggcgcccgaggaagaggcagctacgtggcgtacccacagaacccgggg
ccaggctttcccgattatgggttttattccgcacccagtgaccagcggggggcgccctgc
tcctttgccgactatggctccctggggcctcaggcggctcagatgctgcaaagcgagcac
gccacatctgcctgcaactctcccctgcagcaccttcacagcccggatcagtttaagagc
ccaggtgctaaccctgctcggcccggagccttcccaggtgccaacagtcctgggcctgta
gccgatctgtacggcccgactagtcaggaatcggccgtggggaactacatcagtgctgct
agtcctcagcctggctctggcttcagccacggcatcgctggccccttgattgcgacggct
tttacaaacggataccattga
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