Tachysurus vachellii: 132863204
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Entry
132863204 CDS
T09596
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
tvc
Tachysurus vachellii
Pathway
tvc03030
DNA replication
tvc03410
Base excision repair
tvc03420
Nucleotide excision repair
tvc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132863204 (rfc3)
03410 Base excision repair
132863204 (rfc3)
03420 Nucleotide excision repair
132863204 (rfc3)
03430 Mismatch repair
132863204 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvc03032
]
132863204 (rfc3)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132863204 (rfc3)
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132863204 (rfc3)
DNA replication proteins [BR:
tvc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132863204 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
132863204 (rfc3)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
132863204 (rfc3)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132863204 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
132863204 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
DUF2247
zf-HC2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
132863204
NCBI-ProteinID:
XP_060751858
LinkDB
All DBs
Position
20:8096550..8101101
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLAKLDYHKEQASQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSIVAPSKKKIEINTIASNYHLEVNPSDAGNSDRVVIQELIKTLAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMGTCRLILCCNSTSKVISPIRSRCL
AVRVPLPSTEEVCSVLMGVCKKEGLLLPAELARKIAEKSGRNLRKALLMCEACRVQQYPF
SADQDIPETDWEVYLRETANAIINQQSPQRLLEVRARLYELLTHCIPAEIIMKGLVTELL
SNCDGHLKPEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatgggttgataaatacagaccaacatctctggccaagctggattatcacaaa
gaacaagcaagtcagctaaaaaacctggtacaatgtggtgatttcccgcacctgcttgtt
tatggtccatctggcgctggcaaaaagacacgaattatgtgtctcctgcgtgagctgtat
ggtgctggggtggagaagctgcgtattgaacaccagtccattgtagctccatctaaaaaa
aagattgaaatcaacacaattgccagtaactaccatttggaggtgaatccaagcgatgca
ggaaatagtgaccgtgtcgtcatccaagagctgatcaaaacgctggctcagtcacagcag
atccagtccagcacacagagagagttcaaagtggtgctgctcacagaggtggaccggctc
accaaagatgcacagcatgccctgcgccggaccatggagaaatacatgggcacctgtcgc
ctcatcttgtgctgtaactccacctctaaagtgatctctccaataaggagcaggtgcctg
gctgtgagagtgccactgcccagcactgaggaggtgtgcagtgttctaatgggtgtgtgc
aaaaaggaagggcttcttctcccagctgagctggccagaaagattgcagagaagtcaggc
cgcaaccttcgcaaagctctactcatgtgtgaggcgtgtcgagtgcaacagtatcctttc
tctgcggatcaggacatccctgaaacagactgggaagtttacctcagagagacggctaat
gccatcatcaaccagcagagcccacaaagactcttggaggttcgggcaagactttacgaa
ctgctaactcattgcattccagcagaaatcatcatgaaggggcttgtgactgagctgctc
agtaactgtgatggccatctgaaacctgaggtggctcaaatggcagcctattatgaacac
agattgcagctgggcagcaaagccatttaccacctggaggccttcgtggcaaaattcatg
gccatctataagaagtttatggaggatggacttgacaacttcatgttctga
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