Tachysurus vachellii: 132863432
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Entry
132863432 CDS
T09596
Symbol
frem2a
Name
(RefSeq) FRAS1-related extracellular matrix protein 2a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
tvc
Tachysurus vachellii
Pathway
tvc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132863432 (frem2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tvc04091
]
132863432 (frem2a)
Lectins [BR:
tvc04091
]
C-Type lectins
Lecticans
132863432 (frem2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
132863432
NCBI-ProteinID:
XP_060752220
LinkDB
All DBs
Position
20:complement(8660107..8726028)
Genome browser
AA seq
3101 aa
AA seq
DB search
MLEVFLWFIVMPSVAGSYGRHGLSYAHRAALSEDSILVANNRIRVPFGRSVFIDPINDLV
IEVQPGDKCSLIVLDNDPLSQRPGHLSPKRFPCEFGPNDVKYSHLGSRSPAEDRVRLQLR
YDTQTDTVIIPFMLEIQVLFTQLEIVTKNMPLTVDKLNGISNSIDRRILEFTYDRNSEQC
EVTSLAASSALPRYGELADNSKKLEKMMDCDAFLLADIRYRHTSIHESPNRDYVPMVVEL
RNKENNLLTQEFFRIMIRVREGLQNSPPKPSFVAMMMMEIDQFVMTALTSDMLAAEDTES
DPDDLIFNITTPFSFEEGYIVSTDDRNLPITSFYQRDIKDLKIAYKPPSTDSDTERIFQI
EFEVLDTDGGVSEPFAFMIVIKPMNTLAPVVTKNSGQLLYEGQSRPLFTQNNLEISDEDN
LDSVRITVVNGLRHGDLTILGSSTNYFTPADLQVGIVVYQHDGSDTYSDNIIFRMTDGKN
EVEFLFPITIVPTDDEPPIINANTGLVVFKNQMIPISPLMLSAADIDSEDSTIKFTIEPP
HSTIGEVLLRQSEAPKDPSSWKFNTEDGLYEKTVTEWLQKDITDGKLFYKHTGPHITETV
TDQLIFKAQDDADPPNQSDENTFFIRILPIDDVPPVLFPGTSLQMTVHEYQMTSFNKNVL
HYTDLDSDDRDLKYTVTQPPTDTDEGHPVRFGSIVLTEHHGTEVREFTQAQVNHHKISYS
PPDIELGITAHVAQFHFIVEDTAGNSVKGVFTILVQPVNNKPPEITNTGFTVFERGMHIL
TSAELDVTDLDTESKQISFTLSQSPQHGQVHLSFTDLIKGNTFRLSDISEGRISYVHNGD
ETTSDALKLDVSDGVHIVPISVRIVVRPIDDEMPTLTLSEGTLGSHLSVLENGATEITVN
VIQGKDEDTDDLRLTFIVEDAPAYGAILVNGIPSNMFTQADIINGLVTYSHTSGEIGLSS
KQDNFNLTLNDMSDEWAFGGNKITGVSVHVTILPVDNQAPVVTVVPMFNVTEGDKNIIGG
HHIIVQDTDTLTEEILCTIIVQPNSGYIENISPAPGSEKSRSGTAISAFSIRDISDGHIR
YVQSIHKGVEPVEDRFTFRCSDGVNFSGRLVFPIVIIPTNDEKPEIFMREFVVMEGMNII
IDMPILNGVDADIPVEDLTFIISQPPKHGFILDQLITGSLPVTNFTLEQIKEASSIIYEH
DDSESTEDKFNVILTDGKHKVESTVMIIIIAVDDETPRLAINDGLEIEIGETKEINNKIL
KATDLDSEDRTLAFIIRHGPGQGTLQRKTEHGSLKNITVGMNFTQMDLDLGLVFYTHNGQ
EGIRDLIKFDVTDGSNPLIDRYFYITVSNIDRVFPEVISKGVSLKEGGSVMLTTDLLSTS
DLNSPDENLVFTITRAPVRGHLESTDTPGMPIVSFTQLQLAGSKIYYIHTSDDEIKMDSF
EFEVTDGYNPVFRTFRVSIVDVDNKKPVLTVRELQVLEGQSKLITPFELTVEDQDTAEQF
LKFTVTQLPIHGKLLFNNSHAITSFTKQDLNENLISYKHDGTESYQDSFSFTVTDGTHTD
FYVFPDTVFETHRPQVMKIIISSIDNGIPQIVVNKGVQTLKVLPTGHLGYHITRKVLKAE
DRDSSSETLVFHITTQPEHGYLINLQKGNESIKRFTQADIDELNICYVLKHKNNATSDSF
IFYVEDNGGNKLKEQHFRLDWCWISLQKQSYVVDEQVGILEVVLRRRGYLGETSFVGIGT
LDGSAEKEKDFRGNFQKQVQFNPGQSTATWRLKILTDGMYEQSETFSIILSEPVMGALES
PAVATVEIVDPEDESTVFIPQARLVVEEDTGELLVPLHRRGDVSEELMVLCYTLQGSATG
TVPSTVLSFSDYISRPEGQSSVLRFEKEETEKLCRVVIIDDSIYEPEESFNVSLSMVLGG
RLGSEYPSTRISILPDLDDAPVFYFSDTEYHVDESQGHVDVRVWRTGTDLSKPATITVRS
RKTDPVSAEAGVDYVGISKNLDFAPGVTMQTVRVTILDDLGQPLLEGTEKFELVLRLPSN
GILGEPAKATVLINDSISDIPKMQFKHPLLTGEESDRRLTAVVQRSGDITHQSTVRCYTR
QGSAQVASDFEERPNTDASIITFLPGDTEKPCVLTLVDDSLYEEEEEMRLVLGSATSDSL
YGASIGTKNETLIKIKDRADKPIIKFSETKLSVNEPKESGKVSVVRISVLRLGDSSKVSV
VRVHTKDGSAVSGEDYHPISQDVEFNEGETEHFVDVEVLFDGAREMREAFTIHLKPDENM
VAEIQMAKAIVYIEETNSMADVTFPSLPHVVSLLHYDVRRTVHNAHPPAGYPVVCVTACN
TKHPEYEKTRSICASEHINDTLTHYRWLVSAPTGPDGVTSPMREVDIDTFFTSSKMITLD
SIYFQAGSRVQCAARAVNTNGDEGLELNSPIVSISMEEGMCHPRKVGTVGAEPFSAKLHY
TGTEDPEHANLIKLSVTLPHTDGMLPVLSTRTLSNFELTLSPDGSRVGNHRCSNLLDVDE
VPTRHGFLTKATKSVEQMGESAPYQYNSTMRGLNTLRFYKNLNLEACLWEFVSYYDMSEL
LTVCGGSIGTDGQVLNLVQSDVTLRVPLHVSYVFHSPVGSSGWQHFDLQSELRLTFVYDT
AILWKDGVGSPPQAELQGALYPASMRINDLGRLVVNFRTEAHFRGLFVASHYASSLTSVV
TSTAHPGLTFNLSLVRTEPTYNQPVQQWTFTSDFAVRDYSGTYTVKLIPCTTAINIEYSV
PAVCDPREPVTFDLDIRFQQVSDPVAVEFSLNTQMFLLSKRSVWLSDGSMGFGQESDAAF
SEGDIIYGRVMVDPVQNLGDSFHCNIEKVYLCTGADGYVPKYNPTKLEFGCLADSSSLLY
RFKIIDKAQPETQALHFGDMNFNAVLAVDDPSALSLVKQPGSDGFRLDSAPLFQVASGRE
WYIHTIYTVRSRDNANRGIGKRSVEYHSFTAHNNRVKRSNQDVPAIAEIISAEHNRGTNI
MHIALEHQQAVQAGEVPAEGLVQNEMAKRGSEEEAVMAAGVSLGLVLFGLITVVLFLMLR
SQRRPEKEMRKRSKKEGLTVSGSIQPVTLRSGFEGSDGSEV
NT seq
9306 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagtctttctgtggtttattgtcatgccctcagtggcaggtagttatggacgc
cacggactgtcttacgcgcacagagcagcgctctcagaggactcgatacttgtagcgaac
aacaggatacgtgttcccttcggcaggtctgtttttattgatcccattaatgatctggtg
attgaagtgcagcctggagacaagtgcagcttaatagtgttggataatgatccgctgtcc
caaagacctgggcatctttctcccaaaaggttcccgtgtgaattcggacctaatgatgtg
aaatactcgcatttgggctccaggagccctgctgaagatagagtcagactgcaactcagg
tacgacacccaaactgataccgtcatcataccgttcatgctggagatacaggtccttttc
acccagttggagatagttactaaaaatatgcctctcactgtagataaactcaatggcatt
agcaattcaattgacagaagaatactggaatttacatatgatagaaactctgagcaatgt
gaggtcacatccttggctgctagcagtgcacttcctagatatggtgaactcgcggataac
agtaagaagttagagaaaatgatggactgtgatgcttttctcctagcagatattcgctac
aggcatacttctatacacgagtccccgaacagagactatgttccaatggttgtggagctg
agaaacaaagaaaataatttactgacacaagagttttttcgtatcatgatacgtgtgaga
gaaggactgcaaaacagtcctcccaaacctagctttgtggctatgatgatgatggaaatc
gatcagtttgtcatgactgctttaacttcggacatgttggctgcagaggacacggaatct
gatcctgatgatcttatctttaacatcaccacccccttctcttttgaagaaggttatatt
gtaagtaccgatgatagaaatttaccaattacatctttttatcagcgagatataaaggat
ctgaagatagcatacaagcccccatctacagactcggacacagagagaatatttcagatt
gagtttgaagttttagacacagatggtggagtttctgaaccttttgcttttatgattgtg
attaagcccatgaacacacttgcaccagtggtgactaaaaactcagggcagctgctgtat
gagggtcagtccagacctctgttcactcagaacaatttagaaatcagtgatgaagataac
ctggatagtgtcagaataactgttgtaaatggtctccgtcatggtgatctcaccattctt
ggctccagcacaaattatttcacaccagctgatctgcaagttggtattgttgtctaccag
catgatggcagtgacacatacagtgataacatcattttcagaatgacagatggcaagaat
gaggtggagtttttgttcccgattacaattgttccaacggatgacgaaccccccattata
aatgccaatacaggattggtggtatttaaaaaccaaatgattcccatttcacctctaatg
cttagtgcagcagatattgactcggaagattccactattaagttcactattgaacctcca
cactcaactattggggaagtactgctaaggcaatctgaggctccaaaagatccatcctca
tggaaattcaatacagaagatgggttatatgagaaaactgtgacagagtggctacagaaa
gacattacagatgggaaacttttctacaaacacacaggtccccacatcactgaaacagtc
acggatcagttaatctttaaagctcaggatgatgctgatcctccaaatcaatcagatgag
aacacattcttcattaggattctccctattgatgatgttccacctgtactttttcctggc
acatctttacagatgacagtccatgagtatcaaatgactagttttaacaagaatgtcctt
cattacactgatttagattctgatgacagagatctgaaatacacagtaacccagccacca
actgacacagacgaaggtcatccagtcagatttggttcaatagttttaacagagcaccat
ggcactgaggtaagagaattcactcaagcacaagtgaatcatcataagatttcctacagt
ccaccagacatcgagcttggcatcacagcccacgtcgcacagttccatttcatagttgaa
gacactgctggaaacagtgtaaaaggagttttcaccatattggtgcaacctgttaataac
aaacctccagagattactaacactggtttcacagtctttgagcgaggtatgcatatacta
acaagtgctgagcttgatgttactgaccttgatacagagagtaaacagatttcctttact
ttaagtcagagtccacaacatggtcaggtccatcttagctttactgatttaattaaagga
aatacttttagactatcagatatttcagagggcaggatttcttatgtccacaatggggat
gagacgaccagcgatgctcttaaactagatgtcagtgatggtgtccatattgtaccaatt
tcagtaagaatagtagtgagaccaattgatgatgaaatgccaactttgactctctcagaa
ggtactcttggctctcacctgtctgtgttggaaaatggtgctactgaaatcacagtcaat
gtaatccaggggaaagacgaagacacagatgacctcaggttgacttttattgttgaggat
gcccctgcatatggggcgattctggtgaatggaataccttccaacatgttcacccaagct
gatataatcaacggtttggtgacatattcacatacaagtggcgagattgggctttcttca
aaacaggataattttaacttaaccctcaatgacatgtctgatgagtgggcttttggagga
aataaaatcactggagtatccgttcatgttactattctcccagtggataaccaggcccct
gtggtaacagtggttcctatgtttaacgttacagagggagacaaaaacataattggaggc
caccacattattgttcaagacacagacacactcactgaagaaatcttgtgtactatcatt
gtccagccaaattcaggttatatagagaacatctctccagcaccaggctctgagaagtcc
aggtctggcacagctattagtgctttcagtattagagatatcagtgatggtcatatccgc
tatgtccaaagcatacataaaggagttgaaccagtagaggatagattcacattcagatgc
tctgatggtgttaacttctcaggaagacttgttttcccaattgtaattatcccaaccaat
gatgagaagccagaaatatttatgagagagtttgtagtgatggagggcatgaacatcatc
attgacatgcccatcctgaatggagttgatgctgatattccagttgaagatttgactttt
ataatttcacaaccacccaaacatggttttattcttgaccagctgatcactggctctctc
ccagttactaactttaccttagagcaaatcaaggaagcttctagcattatttatgaacat
gatgattctgagagcacagaagacaaatttaatgttattctcacggatggaaaacataaa
gtagaaagtactgttatgattataattattgctgttgatgatgagactccaagattggcc
atcaatgatggtttggaaattgaaattggagagacaaaagaaataaataataagattctg
aaggcaactgatttagactctgaagataggacacttgcatttataattcggcatggtcct
ggtcagggaactctacagaggaaaacagaacacgggtctttgaagaacatcacagttggg
atgaactttacacagatggatctggacctgggtcttgttttttatacccacaatgggcag
gaaggtattcgtgaccttataaaatttgatgttacagacggtagtaatccactaattgac
agatatttctacatcactgtgagcaacatcgacagggtatttcctgaagttattagcaaa
ggggtatctctgaaagaaggaggaagtgtgatgcttaccactgatttactaagtacaagt
gatctcaacagcccagatgaaaacctggtcttcactatcaccagagctcctgtgagggga
catctggaaagcactgatactcctggaatgcccattgtgtctttcactcaacttcagctg
gctggaagtaaaatctactacatccacacttcagatgatgaaatcaagatggacagtttt
gagtttgaggtcactgatggatataaccctgttttccgcaccttccgtgtatcgatagtt
gacgttgacaacaaaaaacctgtgttgacagtacgtgagctccaggtattagaaggtcag
tctaaacttatcacaccatttgagttgactgtagaggatcaggatacagcagagcaattt
ctgaagttcactgtcactcagttgcctatccatggtaaactgctcttcaacaacagccat
gcaattacctccttcacaaagcaagacctgaatgaaaacttaatcagttacaaacatgat
ggcacagagtcctatcaggacagcttttctttcactgtcactgatggaacacacactgat
ttctatgtatttcctgacacagtgtttgaaactcacaggcctcaagtgatgaaaatcatt
atttcatcgatagacaacggcataccacaaattgtggtgaacaaaggtgttcaaacgttg
aaagtcttgccaacgggccacctaggctatcatatcaccagaaaagtgttaaaggcagaa
gaccgagacagcagctcagagaccctggtttttcacatcaccacccaaccagagcatggc
tacctgatcaaccttcagaaagggaatgagtccattaaaagatttactcaagcggacatt
gatgagctgaatatctgctacgtgttgaaacataagaacaatgccaccagtgacagcttt
atcttctatgttgaagataatggagggaataagctgaaggagcagcacttccgtctggac
tggtgctggatctctctacagaaacagagctacgtggtggacgagcaggtcggaatcctg
gaggttgtgctcagacgcagaggatacctaggggaaacttcttttgttgggattggcact
ttggatggcagtgctgagaaggagaaggactttcggggaaattttcagaaacaggtgcag
tttaatccaggccagagcacagctacatggaggctcaagattcttactgatgggatgtat
gagcagtctgagaccttcagcatcattttgtctgagccagtcatgggagcactggagtca
ccagcagtggcaacagtggaaatcgtggatcctgaagatgagtctacagtcttcattccc
caggcaagacttgttgtcgaggaggacaccggagagctgctcgtcccgttacacagaaga
ggagacgtcagcgaggagctgatggtgctctgctacacgctgcaaggctcggctacaggg
acagtccccagcacggttctctctttctcggactacatctccagaccagagggacagagc
agcgttctgcgctttgagaaagaagagacggagaaactttgccgtgtggtgatcatagac
gactccatttatgagcctgaggaaagctttaacgtctctctcagcatggtgttaggcggc
cgcctcggctccgaataccccagcacacgcatcagcatcctaccagacctggacgatgct
cctgtgttctacttcagtgatacagagtaccacgtggacgagagccaaggtcacgttgac
gtgcgagtgtggaggaccggaacggacctctccaaacctgccaccatcactgtccgatcc
cgtaaaactgatccagtgtcagctgaagctggagtggactacgtgggaatcagtaagaat
ttagactttgccccaggagtgaccatgcaaaccgttcgagtcacaattctggacgatctc
ggccagccgctgcttgagggcactgagaaatttgagcttgttctgcgcttaccctcaaat
gggattctgggagagccggcaaaagccaccgtcttaatcaacgattccatctctgacata
ccaaagatgcagtttaaacatcctcttctgaccggagaagagagcgatagacgtctcact
gctgtggtccagcgcagtggagatatcacacaccaatccaccgtgcgctgttacacacgc
cagggatctgctcaggtggccagtgacttcgaagagagacccaacactgatgcgtcaatc
atcaccttcttaccaggtgatacggagaagccttgcgttttaacgttagtggacgactcg
ctatatgaagaagaggaagagatgaggcttgtgctcgggagtgctacaagtgactccctg
tatggagcatcaataggcacaaagaatgaaaccctcatcaagattaaagaccgtgctgac
aagccaattatcaagttttctgagacaaagttgagtgtgaatgagccaaaagagtctggg
aaggtgagcgttgtgaggatctctgtgctccgactgggtgattcctccaaagtgtccgtg
gtgagagtacacactaaagacggttcggctgtgtcaggagaagactatcaccccatctct
caggatgttgaatttaatgaaggtgaaacagaacattttgtggatgtggaggtcctgttt
gatggagccagagaaatgagagaagccttcaccatccacctcaaacctgatgaaaacatg
gtggctgagatccagatggccaaggccatagtgtacattgaagagaccaacagcatggct
gacgtcacattcccctcactgccacatgtcgtgtctctgctgcactatgatgtcagaagg
accgtacacaatgcccacccaccagccggctatcctgtggtctgtgtgacggcatgcaac
actaagcacccagaatatgagaaaacgcgctcgatttgtgcaagtgagcacatcaatgac
acgctaacacactatcgctggcttgtcagtgcccccactgggccagacggtgtcaccagt
ccaatgagggaagtggatatcgacacctttttcacctcctcgaagatgatcacgctggac
tccatctacttccaagcgggctcacgggtccagtgcgccgctcgtgccgttaacaccaac
ggggatgaaggcctggagctcaacagccccatcgtttccataagcatggaagagggaatg
tgtcaccctcgtaaagtgggaacagtaggtgctgagcctttctctgccaagctccactac
accggcaccgaggacccagaacatgccaacctcatcaagcttagtgtcacattgccccac
acagatggcatgctcccggtgctctcgactcgtactctttccaacttcgagctgaccctg
agtccagatggcagccgtgtagggaaccaccggtgctccaacctgctggacgtggacgag
gttcccacacgccacggcttcctcacaaaggccaccaagagtgtggaacaaatgggagag
agcgctccttaccaatacaactctaccatgagaggcctgaacactctacgcttctacaag
aaccttaacctggaggcctgtctgtgggagtttgtgagctattatgacatgtctgagctg
ctcacagtctgcggtgggagcatcgggactgacgggcaggtgctaaatctggtgcagtcc
gatgtgactctgcgtgtccctctccatgtctcctatgtgtttcactcacctgtgggctcc
agcggctggcaacactttgacctacagtctgaactgaggcttacttttgtgtacgacact
gccatcctgtggaaggatggcgtcggtagccctcctcaagctgaactgcaaggagctctt
tacccagccagtatgaggattaatgatctgggccgtctggtggtcaacttccgcacagag
gctcactttcgcgggctgtttgtggcctcacactatgcatcttctttgacctcagtggtc
acgagtacagcccacccagggttaacctttaacctttccttggtcagaacggaacccacc
tacaaccagcccgtgcagcagtggactttcacatcagactttgctgtgcgtgattactct
ggtacctacacggtaaagctaatcccctgcaccacggccataaacatcgagtactctgtt
cctgcggtgtgtgaccccagagagccggtcacatttgacctggacatcaggttccagcag
gtaagtgatcctgttgctgtggagttcagtctgaatacacagatgttcttgctgtcgaag
agatctgtgtggctctctgatggatctatgggctttggacaggagagtgatgcagcgttc
tcagagggtgatatcatctacggccgagtgatggtggatccagtgcagaacctgggggat
tcatttcactgtaacattgagaaggtttatttgtgcactggagcagatggatatgtgccc
aagtacaaccccaccaagttagagtttggctgcttggcagattcttcttccctgctctac
agattcaaaataattgacaaagcacagccggagactcaggctctgcattttggtgatatg
aacttcaacgcagtgctggcagtagacgacccatcagccctctctctagtgaagcagcct
ggctcagatggattcagactggactcggctcccttattccaggtggcatcaggccgtgag
tggtatatccacaccatttacactgtgcggtccagagacaatgcaaaccgtggcatcggg
aaaagaagcgtggagtaccattccttcacggcacacaacaatcgtgtcaagcgctctaac
caggatgtgcctgctattgctgaaataatcagtgctgagcacaatcgaggcaccaacatc
atgcacatcgctttagagcatcagcaggcagtgcaggctggtgaggttcctgctgaaggc
ctggtacagaatgaaatggccaaacgtggcagtgaggaagaggcagtgatggcagcagga
gtctcacttgggctggtgctcttcggcctcatcacagtcgtgctttttctaatgctgcga
tcacagaggagaccagaaaaggagatgagaaagcgatcaaagaaggagggactaacagtc
tctggcagcatacagccagttacattgaggagtggttttgaaggcagcgatggctctgaa
gtctga
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integrated database retrieval system
