Tachysurus vachellii: 132863541
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Entry
132863541 CDS
T09596
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132863541 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132863541 (rsf1b.1)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
132863541 (rsf1b.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
132863541
NCBI-ProteinID:
XP_060752385
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All DBs
Position
20:3509715..3522213
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AA seq
1667 aa
AA seq
DB search
MAASAAAAGSSPGLCPSFAVICSFLERYGALLDLPELSFPQLERCLQETSTVPKLLVDLH
VKLLRKIGKSVSADRWEKYLVKICQDFNTTWAWELEKKGYREMTVECKTGILKYLCECQF
DDNVKFKTAINEEDPDKMRLQPIGRDKDGLMYWFQLDQDHNVRVYMEEQDDLDGSSWKCI
VRNRNDLAQILELLKTQIDPKLLVKKDQEEGSCSTSPNEETEENKKKEDDGETKKDECLD
EEKSPKTDQDDPEKDVTLAQTDSAKQEHAEGKEALTDKDTKEDIGSEKPLAVEGIVTKAV
KEEPMEEDKPINNKSEPTSEKTAAPLPSEHTGEEKKKSDEIQKALKNDQQAKMPLKKREM
KRSEDFDTTNCGSGGSSIIVRNPAVKEVRPTGEDNGLSSENHNGNVSPAVAAEGSSQASN
NLQIKQTGSQAIPKDQQADVKETKKLSDKKQEERHEETQEKEDATTAKSQASMEESMDVE
DPAVSTGDQETSPKCKETAQTTEKACEVISEVIPSQAGSENADGSDKMEITEDCSKPLDK
EAPENTCVMKPTHDAENEKDPETLKETPCPNETDLDQKREEVNLESGDAASNEKADAAKD
DKTQMGTEAPMETETSTSQDSTKQQSHAHEQSGLDLQKADKPSSCEENKSPDGEASSTTL
EDCALLDGDKKPESSSTKQSDTQEQPKEDIIPVKETQESEPLKEDKKLTEDSDVSKEKEN
PSSLKENKKTENCETSTVCEETNAETATKESIKSEHDRMSDNTAMPDTEGSDSVAIQKES
GADQEKQDAIITTDEAPSPAVSKTEKAVNEEKTVEVTTADTKDNDTNPDNKEGTEQKVAL
QRDPSDATSNVCDAEPQKEACSEKIVQDEHPVEESKASTEESSEDQKEHSEQKSTSEKEA
CLSGEPTADQTQAKEETKTSKGEAEESKAGPEVHQEGIRLKIKVPAHRRRAEVQREEGKG
DSESEASEGRCLRRSPRICRPTAKLVEIQDRKVDKKQVTPSVEKEKEENQEKEGEENTVQ
KKPREKKVEQEGQAKPKGRRQRRVRWSRLRTRRKKKGSEEDEDEDAESSSEEEVTEEDDS
DEDYQVEKKKRRRNRNKERNSSDTSTSSSDDLPPNDDPCKHCGLPNHPELILLCDSCDSG
YHTACLRPPLMIIPDGEWFCPPCQHKLLCDKLEEQLQNLDVALKKKERAERRKERLVYVG
ISVENIITPVVEAEEEKQEEVVKEKKKEVKKKSWGRRSTRAKKYISYRFDEFDEAIEEAI
EEDIKEAEGGGAGRGKDMANITGLRGKDMSIILQDEGKENGRAKRPNAAQRRKKRRRLND
LDSDSTMDEEESEEEFRLSESSEEEDFLASDNDVESEAEAKSFDDSDFGSDGQGPITGNF
PSRRRPNKRWKTRPRRRHRPRGYSDDEELEETEEEEEEIVTEGSSEFSDSDLDMRRRRSH
RSQKKQVNYCEASDSDASQGSTNRDKAKKRRRLSSSESDASFHSMESEEEDGKSKKQRVV
LSEEESRKRHRRLSLKRRRESEDDDDNSSDSDDSEEEERPVRKRVNRIDSDDSDEEEAEK
EKKSTEKEAEDTVVKGVSPLDYNLEISPTNGQSPMKTLEGLISRPATGMANPTLMSQIGL
KNSSTPQPVSVGANGLVVQEMAPQDEDEDDLLGVTDLVDYVCNSEQL
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcggcagcggcgggttcttcccccgggttgtgcccaagcttcgccgtg
atctgctcttttttagagcgctatggagcccttttggatctgcccgagctttcattcccg
cagctggagcgatgtctgcaggaaacgtccacagttcctaagctgctggtagacctccat
gtgaagttgcttcggaaaataggcaagtccgtatctgcagacagatgggagaaatatctt
gtaaagatctgccaggatttcaacaccacctgggcatgggaactggagaagaagggatat
cgtgagatgaccgtggagtgtaagactggaattctcaagtacttgtgcgaatgccagttt
gatgacaacgtcaagtttaagacggccatcaatgaagaagaccctgataaaatgcgtctc
cagcccatcggcagagataaagatggcctcatgtattggttccagcttgaccaggatcac
aacgtgagggtgtacatggaggagcaggatgatttagacggctcatcctggaaatgtata
gttaggaacagaaatgatctggcacagattcttgaactcctgaagacccagatcgatccc
aaactgttggtcaaaaaggatcaggaagaaggttcatgtagcaccagcccaaacgaagag
actgaagaaaacaagaaaaaagaggatgatggagagactaagaaagacgaatgtctggat
gaagagaaatctcccaaaactgatcaagatgatcctgaaaaagatgtcaccttagcacaa
actgacagtgcaaagcaggaacatgcagaaggaaaagaagcactaacggacaaagacact
aaagaagatataggatccgagaagccccttgcagtcgagggaatcgttaccaaagcagtc
aaagaggagcccatggaagaagacaaaccaatcaacaacaaatccgagcccacatcagaa
aagactgctgcaccactgccatcagaacacacaggggaggagaaaaagaaatcagacgag
atacagaaagctctgaaaaatgaccaacaggcgaaaatgcccctgaaaaaacgtgagatg
aaacgaagtgaggattttgacaccaccaattgtggaagcggtggcagcagtatcattgtg
cgtaacccagccgttaaagaagttcggcccaccggtgaggataacggattgagcagtgag
aatcataacgggaatgtctcgcctgccgtagcagcagagggcagcagccaagcgagcaac
aacttgcagataaagcaaacaggatcgcaagctattcctaaagatcagcaagcagatgtc
aaggaaacaaaaaagctttctgacaaaaaacaagaagagagacatgaagaaacgcaggag
aaagaggatgcaacgacggctaagagccaggctagcatggaggaatccatggatgtggag
gatcctgcagtttcaacaggggatcaagaaacctcaccaaaatgtaaagaaacggctcaa
acaactgaaaaggcatgtgaagtgatctctgaagtaatcccctcacaagcgggttcggaa
aacgctgacgggtcggacaagatggaaattacggaagactgttcaaaacctctcgataag
gaagcacctgagaatacttgtgtgatgaaacctacgcacgatgctgagaatgagaaggat
ccagagaccttaaaagaaactccatgtcctaacgagacagatctggatcagaagcgagaa
gaagtaaaccttgagtctggtgatgcagcctcgaacgagaaagcagatgctgcaaaagat
gataaaacacagatggggactgaggcccccatggagactgaaacatctacatcacaagac
tctacaaaacagcaaagccatgctcatgaacagagcggactagatctccaaaaagcagac
aagccttcttcatgtgaagaaaacaaaagtcctgacggtgaagcatcttctacaactcta
gaggactgtgccttattggatggtgataaaaaacctgaatcaagttccacaaagcagagc
gacacacaggagcaacctaaagaggatataatcccagttaaggaaacccaagaatctgaa
ccattaaaggaagataagaaattaactgaagattcagatgtatctaaggagaaggaaaac
ccatcctcgctaaaggaaaacaagaagactgaaaactgtgaaacatcaacggtgtgtgaa
gagacaaatgcagaaactgcaaccaaagaatctataaaatcagagcatgaccggatgtct
gataatactgccatgccagatacagaaggatctgattcagttgctatccagaaagaatca
ggagcagatcaggagaaacaggatgccattataacgacagatgaagctccttctcctgca
gtatccaaaacagagaaagcagtgaacgaggagaagacggtggaagttactacagcagac
accaaggataacgacacaaacccagataataaagagggaacggaacagaaagtggcactt
caaagagatccttctgatgccacgtcaaacgtttgtgatgctgaacctcaaaaggaagct
tgcagtgagaagatcgtgcaggacgagcatccagtggaggagagcaaggcttctacagag
gaatccagcgaggaccagaaagaacacagtgaacagaaaagcacttccgagaaggaggct
tgcctcagtggcgaacccacagcagatcagactcaagcaaaggaagagacgaagacgagt
aaaggagaagcagaagagagcaaagcggggcctgaagtacaccaagaaggaattcgtctg
aaaatcaaggtcccagctcacagacggagggcagaggtgcagcgagaagagggaaagggt
gactcggagtctgaggcaagcgaagggagatgtctaaggcgctcgcccaggatttgcaga
ccaacagccaagctggtagaaatccaagaccggaaggtggacaagaaacaggtcacgcct
tcagtcgagaaggagaaagaagaaaatcaagaaaaggagggagaagaaaacacagtgcaa
aaaaagccaagagagaagaaggttgagcaagaaggtcaagctaaaccaaagggaagacgc
cagaggcgggtgcgatggtccaggttgcggacacgacgcaaaaagaaaggttccgaggaa
gacgaggacgaggatgcggagagctcaagtgaagaagaggtgaccgaggaagacgacagt
gatgaggattaccaggtggagaaaaaaaagagaaggaggaaccgcaacaaagagaggaac
agctctgatacttctacgtcttcttcagatgacctcccaccaaatgatgacccctgcaaa
cactgtggcctgcctaaccatcctgagctgattctgctgtgcgactcctgcgacagcggc
tatcacacagcgtgtctccggcctcctctcatgatcatccctgatggcgaatggttctgt
ccgccgtgccagcataaactgctttgtgacaagctggaagaacaattacagaatctagac
gtggcacttaaaaagaaggaacgtgctgagcgaaggaaagagcgtctggtctacgttggg
atcagcgtcgaaaatataatcacgcctgttgttgaagcagaggaagaaaaacaagaagag
gttgtgaaagaaaagaagaaggaggtcaagaaaaagtcctggggccgaagatcaaccagg
gccaaaaaatatataagctacaggtttgatgagtttgatgaagctatcgaggaggcgatt
gaagaagatatcaaagaggcagagggaggaggagcaggccgtggtaaggacatggctaat
atcacaggcctcagagggaaggacatgtccatcattttgcaggatgaaggaaaagaaaat
gggagggccaagcgtccaaatgctgcacagcggcggaaaaaacggcggcgcctcaacgac
ctggacagcgacagcaccatggacgaagaggagagcgaggaagagttccgcctcagtgaa
agcagtgaggaggaggattttttggcgtccgataatgacgtggagagtgaagcagaggca
aagtcctttgacgacagcgacttcggcagcgatggccaaggaccaattacaggcaacttt
ccttccaggcggaggccgaataaacggtggaagacgcgaccccgcaggcgacacagaccc
agaggttactctgatgatgaagagctagaggagactgaggaggaggaggaagaaatagtg
accgagggttccagtgagtttagtgacagcgacctggacatgcgcagacgccgttcccat
cggagccagaaaaaacaggtcaactactgcgaggcgtctgactctgatgcctcccagggc
agcaccaacagggacaaagccaagaagcgcaggcgcttatccagctccgagagcgatgcg
agcttccactccatggaatctgaggaggaagatggaaagagtaaaaagcagagagtcgtc
ctttccgaagaggagtctcgcaaacgacacaggcggctgtcactgaagcgcaggagggag
tccgaggacgatgacgacaacagcagtgattcagatgattccgaggaagaagagcggccc
gtccgaaagcgggtaaaccgcatcgactctgacgacagtgacgaggaggaggcagagaag
gagaagaagagcacagagaaagaggcagaggacaccgtagtgaaaggggtcagccctcta
gactataacctggaaatttctcctactaacggacagagccctatgaaaactctggagggt
ttgatctcacggcctgccactggcatggctaaccctacacttatgagtcagatagggctg
aaaaacagcagtacaccacagcccgtgtctgtcggcgccaatggcctggttgtccaggag
atggcgccgcaggatgaagacgaggatgaccttttgggggtcacagaccttgtagactat
gtctgcaacagtgaacagttgtaa
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integrated database retrieval system