Tachysurus vachellii: 132863629
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Entry
132863629 CDS
T09596
Symbol
trpc4a
Name
(RefSeq) short transient receptor potential channel 4a
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132863629 (trpc4a)
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132863629 (trpc4a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
132863629
NCBI-ProteinID:
XP_060752526
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All DBs
Position
20:8822331..8840555
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AA seq
945 aa
AA seq
DB search
MSQLYYRRTDNSSYRDRIPLRIVRAESELSPLEKAYLNAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIGIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSVPQPHEVRCNCVE
CVSGSDVDSLRQSRSRLNIYRALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKAE
YEELSHQCKQFAKDLLDQTRSSRELELILNYRDDINLLEDEVNNTDLARLKLAIKYHQKE
FVAQPNCQQLLASRWYDEFPGWRRRHWVGKFVTCIFIGLLFPLFSIFYLIAPKSHFGLFI
RKPFIKFICHTASYLTFLFLLLLASQHVVTTESDRQGPAPTTVEWMILPWVLGFIWAEIK
QMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTKYSDFKPRNDWEMSHPTLVAEA
LFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETDASNKTGNCKGIRCVQQNNAFSTLFETLQSLFWSIFGLISLYVTNVDPEHQFTEFV
GATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPPP
FNIIPSPKSAWYLIRWIKKHICKRTTAERTETFGSISRRAAKNVHINHQYQEVLRNLVKR
YVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGNKPGLQTSKGSTGASNMAYS
DHPMKCSTAPTGEQLKSKLKLFSVTAAILQQNSKANTKNTEHSLANGSIPTPSEITSCNR
TTSDISGLYHQIRHRGTTDPGRIYSVCEEVGESDTEELVENNKNNKTSESLMNKSIENEI
DESSSKTNEVQKLTEEGNRISDIPCICYEDGNDDNTENYEEISRL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgtattaccgccgtactgataactcctcatatcgagaccgcatcccactt
cggattgtgcgggctgagtcagaactgtctcccctagagaaggcctacctgaatgccgta
gaaaagggtgactatgccagtgtgaagcaagctcttgaggaggctgagatctacttcaaa
atcaacatcaactgcattgacccgcttggtcgcacagccctgttaatcggcattgagaat
gagaacctggagatcattgaactcttgctcagttttaacgtatatgtgggtgatgcactg
ctccatgccatacgcaaagaggttgtgggtgctgtggaactactgctcaaccacaagaag
cccagtgggggcatgcaggtgcctcctattctgctagacaaacagttctctgacttcacc
cctgatataacacccattattctggctgctcacaccaacaactatgaaatcatcaagctt
ctggtgcaaaagggcgtctcggtaccccagccacatgaggtgcgctgcaattgtgtggag
tgtgtatccggctcagatgtggatagcctgcgccaatcacgttcccgtcttaacatctat
cgtgcactgtccagcccatcactgatcgccctgtccagcgaggacccgttcctcacagcg
ttccgcctcagctgggagctacaggagctcagcaaggtggagaacgagttcaaggctgag
tatgaggagttgtcacaccagtgcaaacaatttgccaaggacctgctggaccagacacgc
agttcccgagagctggagctcatcctcaattacagagatgacataaatcttctggaggat
gaggtcaacaacactgatcttgccaggctcaaactagctatcaagtatcatcagaaggag
tttgtagcacagccaaactgtcagcagctcctagcatcccgctggtatgatgagtttcct
ggctggaggagacgtcactgggttggcaaattcgtcacatgcattttcatcggcctcctc
tttcctctgttctccatcttctatttgatagcccccaagagccactttggtctttttatt
cgcaaacccttcatcaagttcatctgccacactgcctcctacctgaccttcctcttcctc
cttcttctggcctcccagcatgtggtcaccactgagtcggatcgtcagggtccagctccc
accactgtggaatggatgatactgccttgggtgcttggctttatctgggctgagatcaaa
cagatgtgggatggaggctttcaggattatgtccatgactggtggaacctcatggatttt
gtcatgaattctctctatttagccactatctctctaaagattgtagcttatacaaagtat
agtgactttaaacctaggaatgattgggagatgtcgcatcctaccctggtggcagaagca
ttatttgccatagcaaacatcttcagttctctgcgcctaatttcactcttcacagctaac
tcccacctgggtcctctgcaaatttctctgggccgcatgctcctggacatccttaaattc
ctcttcatctactgtttggtgcttttagccttcgcaaatggcctcaaccagctatatttc
tattatgagaccgatgcttcaaacaagacagggaactgcaagggtattcgttgtgtacag
cagaataacgcattctctacgttatttgaaaccctccagtctttgttctggtccatattt
ggcctcattagtctgtatgtgaccaatgttgacccagaacaccagttcacagaatttgtt
ggagccacaatgtttggaacctataacattatttccttggttgtgcttctcaacatgttg
attgccatgatgaacaattcctatcaacatatcgctgaccatgctgacattgagtggaag
tttgctcgaactaagctgtggatgagctattttgaagagggaggcactttgcctcctcca
tttaatataatccccagccctaagtctgcatggtacctgatcaggtggatcaagaagcac
atatgcaagaggacaacagcagagagaactgagacttttgggtcaattagcaggagagct
gcaaagaatgtccacatcaatcaccagtatcaggaggttctgcgaaacttggtgaagcgg
tatgtggctgcaatgatcagagacgccaagacagaagaaggcctaacagaagagaacttc
aaggagctaaagcaggacatttctagtttccgatatgaagttttaggaatgatgaaagga
aataaaccaggactacagacttctaagggaagtacaggggcctcaaacatggcctattct
gaccatcctatgaagtgttcaacagctcctactggagaacaactgaagagcaagctaaaa
cttttcagcgttactgcagctattcttcaacaaaattcaaaagcaaatacaaagaataca
gaacacagccttgctaatgggtctatccctacaccatcagaaattacttcatgcaacagg
acaacaagtgatatctctggattgtatcaccaaatccggcatagggggacaaccgatcct
ggcaggatttattctgtgtgtgaagaggttggggagtcagatacagaggaactggtggag
aataacaagaataacaaaacctctgagtcacttatgaacaagtccattgaaaatgaaatt
gatgagagcagtagtaagacaaatgaagtgcaaaaattgacagaggaaggaaatagaatt
tctgacataccatgtatatgttacgaagatgggaatgatgataatactgaaaattatgaa
gaaatcagcagattatag
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