Tachysurus vachellii: 132863754
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Entry
132863754 CDS
T09596
Symbol
depdc5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
tvc
Tachysurus vachellii
Pathway
tvc04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
132863754 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132863754 (depdc5)
Membrane trafficking [BR:
tvc04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
132863754 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
132863754
NCBI-ProteinID:
XP_060752705
LinkDB
All DBs
Position
20:18713082..18750668
Genome browser
AA seq
1594 aa
AA seq
DB search
MSSGDKMTVTTKTKTYKLVVHKKGFGGSDDELMMNPKVFPQVKLGDIVEIAHPNDEYSPL
LLQVKSLKEDLQKETISVDQTVAQAFKLRAYQDVIINIVDPKDVTLDLVELTFKDQYIGR
GDMWRLKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSSSAMV
YIFIQMSCEMWDFDIYGDLYFEKAVNGFLSDLFTKWKEKNCSHEVTVVLFSRTFYAAKTL
DEFPESQRGAIRQDHEGRYYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYPVLVRLKGAD
GFPCGQNSTAVQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMI
LTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRTVPGDSRLDDYNLPHWINHSFYTSKS
QGLCSSFTPRIKLAGQKPHVEKLKSSKEHSLGAPRDSENSLPIQVDYDAHDAQVFRLPGP
ARAQRGTNFRSSREKEASIRKSWCSPEVGGGHYSGCSPPSRHVGGAEEQRSLASDDSLGR
ISNILLIPRQPPQYEVSSSLGYTSCGRGMELLEKLVESQRDSSAPGRFTVGSAESTLHIR
PGGYTPQRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSE
QRDPTHTSAELLELAYHEAMGRRTGLPQTADSVGTDDYSGSPASSISTGTPVNRGSIDEC
SSISDPILQLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPERQSLQNDYTEGCYDL
LPHTDLERRDDEAPVISAPRVFEEFICQRLMQGFQIIVQPNSRKAPPTVAPPLSSSPLYS
RGLVSRRKAEEEESQYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESIQIQYGYSLCPPH
ADGHFVPCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARR
VADGEGHWDVYGEGPGAAAGSGDWTLLDGFIRFLEGLNRIRRRHRSDRIIRKGGAIKGLQ
VTSPLSPYTAEPLAPPMGKKGASALTTLLELDQTHKTLEEQQAASQCAVVKANTSFSDAT
AVITMATTYVDSPRKDAAFMLDFIRSPRSSYLSHSQMPAELPASNPADPGSAEKGGNLSN
DRMVVGGATDPASGPEPGAQQDSLSSSSTMREILEAIKHPNTGVQLLPEQKGLPPNCFIS
AEVVQWLMNTVENVATQGIAVEIMQKMLDEGLIVHACGEAMRTFVYGFYFYRIVDKDNEK
APCSSSISAAALDDFALFQRKWFEVALAMEESRPCDLPTFLLPWLPSRPASYASRHSSFS
RSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGNFSPNTAFEIKLHWM
AVTAAVLFEMVQGWHRKAASCGFLLVPSLEVPFALPSYLYGDPLRAQLFIPLNIQCLLKD
ASENLFDGFEPETYWDRMQLFQEAILYRFGFVQDKFSASAFSFPAENKPQYIHVTGTVFM
QLPYSKRKYPSGQQRRRRNSASSASQSLFGPDEHVGYHWAYNTMLTKAWRTGVLGDEKLA
ERLLRDFTDFCSNKDNRLMSFWENCVEKMNSSAP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgagttctggagataaaatgacagtcacaaccaaaaccaaaacctacaagctggtcgtc
cataagaagggctttggaggaagcgatgatgagctgatgatgaacccaaaagtgtttcct
caggttaaactgggggacattgtcgagatcgcacaccccaatgatgaatacagcccgctc
ctgctccaggtgaaaagcctgaaagaagacctacagaaagagacgatcagcgtggaccag
accgtcgctcaggccttcaagcttcgcgcgtatcaggatgtcattattaacatcgtggat
cccaaggacgtgaccctggatctagtagagctcaccttcaaagatcaatacatcggccga
ggggacatgtggagactgaagaagagtctggtgagcacgtgtgcatatgtgacccagaaa
gtggagtttgcagggatcagggctcaggcgagtgagctgtgggtaaaaggcgagaaggtc
acctgtgggtacatcagcgaggacactcgggtggtgtttcgctccagctcagccatggtg
tacatcttcatccagatgagctgtgagatgtgggacttcgacatctacggtgatctttat
ttcgaaaaggcagtcaacggtttcctctctgacttgttcaccaagtggaaagaaaaaaac
tgcagccatgaggtgacagtggtgttgttctctcgcactttctacgctgccaagacacta
gatgagtttcctgagagccagagaggagccatcaggcaggaccacgagggacgctactat
gaggatttctacagagtggtggctcagaacgagaggagggacgagtggacgtctctgctg
gtcaccattaagaagctctttatccagtatcccgtgctggttcggctcaaaggagcagat
gggtttccttgtggacaaaactccactgctgttcaggggaattacctcgaagccatcaac
ttgtcttttaacgttttcgataaacattacatcaaccggaacttcgaccgtacgggtcag
atgtcggtggtgatcacgccgggggtcggagtgttcgaggtcgaccggctgctcatgatc
ctcactaaacagcgcatgattgacaacggtatcggagtggacctggtgtgtatgggagag
cagccgcttcacgccgtcccactctttaagctacacaaccgaacggtaccaggcgactcc
agactggatgactataatctgcctcattggatcaatcacagcttctacacgtccaagagt
caaggcttgtgtagctcgttcactcccagaattaaactcgcaggtcagaagccccatgtg
gagaagttaaagagcagcaaagagcactctcttggagcccctagggactcagagaacagt
cttcccatccaggtggactacgatgctcacgatgctcaggtcttcagacttcctggacct
gcgagagcacagaggggaactaatttccggtcaagcagagagaaagaggcgagcattaga
aagagctggtgctcgccggaggtgggtggaggacattacagtggctgctctcctccttcc
cgtcatgtaggaggcgcagaggagcagcgcagccttgcatccgacgacagtctgggccgc
atctcaaacatcctactgatacctcgccagccgcctcagtacgaagtcagcagctccctc
ggttacaccagctgtggcagaggtatggagctgctagagaagcttgtggagtcacagcga
gactcgagcgctccaggacgcttcactgtgggcagcgctgagtcgacgctgcacatccgc
ccgggcggttacacgccacaaagagctctcatcaatccatttgctccctcacgcatgccc
atgaagctcacctccaaccgccgccgctggatgcacaccttccctgtcggtccttctggg
gaagccatccagatccaccatcagactaggcagaacatggccgaactgcagggcagtgag
cagcgtgaccccacacacacttctgctgagctgctggaactggcctatcatgaagcaatg
ggccggcgaacaggactccctcagactgcagacagtgtgggaactgatgattattctggt
agtccagccagcagcattagcacaggtacacccgtcaaccgcggctctatcgatgagtgc
tccagcatttcagatccaatcctgcagctctctgcccctcccacagtgccttcgttctgc
tgtacagttggcgtggactggaagtctctgaccacgccggcttgtctccctctcaccact
gactatttccctgaacggcagtcgctgcagaacgactacaccgagggctgctatgatcta
ctgccacacactgacctggagcggcgtgatgacgaggcccctgtgattagtgctccacgt
gtgtttgaggagttcatctgccagaggctgatgcagggctttcagatcatcgtccagccc
aacagcaggaaagctccgcctacagtggctccgcccctcagcagcagccctctctactcc
aggggtctggtgtctcggaggaaagccgaggaagaggagagtcagtattggctcagtatg
ggacgaactttccacaaagtctgtctaaaagacaaaatcatcactgttacacgctacctt
cccaagtatccatatgagtccatccagattcagtacggctacagtctctgcccccctcat
gctgatggccattttgtgccctgctgggtggagttcagtcacgagagactggaggagtac
aaatggaactacttggaccagtacatctgctcagccggctctgaggacttcagccttata
gactctctaaagttctggcgcactcgcttcctgttgctcccagcaggcggagccaggcgt
gtggcagacggtgagggccactgggatgtgtatggggagggtccaggggcagcagcaggg
tctggagactggactctgcttgatggattcatacgctttttagaggggctgaacagaatc
cggagacgacatcgatctgatcgtattatccgaaaaggaggagccataaagggtcttcag
gtgacgtcaccactctctccttacactgcagagcctctagcacctcccatgggtaagaaa
ggtgcgtcggctctcactacactgctcgagctggatcagactcacaagactctggaggag
cagcaggccgcctctcagtgtgcggtggttaaagcgaacacgtcattcagtgatgctact
gctgtcattaccatggcaactacttatgttgacagccctagaaaggatgctgcgttcatg
ttggattttattcgtagccctcgctcctcctacctgtctcactctcagatgccggctgag
cttcctgcatccaatcctgctgatcctgggtcagcagagaaaggagggaacctatcaaac
gacaggatggtggtgggcggtgctacggaccctgcttctgggcctgaaccgggggctcag
caggacagcctgtcctcctcctccaccatgcgggagatcctggaggccatcaaacaccca
aatacaggtgttcagttgttgccagaacagaagggtttgcctcctaactgctttatcagt
gcagaggtggttcaatggctgatgaacacagttgagaacgtggccacgcagggcatcgct
gtggagatcatgcagaaaatgctagacgaaggtctgatcgttcacgcgtgcggcgaggcc
atgcgcacttttgtctacggcttctacttttacagaattgtggataaggacaatgagaag
gctccatgcagcagttctatctctgcagcggcgctcgacgactttgcgctgttccaaagg
aaatggttcgaggtggcgttggcaatggaggagtctcgcccctgtgatctgcccaccttc
ctgctgccgtggctgcctagccgacccgcctcgtacgccagccgtcacagctctttcagc
cgcagcttcgggggacgcagccaagccgctgccctgctagctgctacagtacctgagcag
aagacagtcactctggacgtagacgtaaacaaccgcagcgatcgtactgaatggtgcagt
tgctattaccatggtaacttctcacccaacacagccttcgagatcaagctgcactggatg
gccgtgacggcagcggttctcttcgagatggttcaaggctggcacaggaaggcagcgtca
tgcggtttcctgctggtgccgtcgctggaggtgccgttcgctttgccctcatatctgtac
ggagaccctctgcgtgctcagctctttatccccctcaacatccagtgcctgcttaaagac
gccagcgaaaacctgttcgacgggtttgaaccagagacgtactgggaccggatgcagctc
ttccaggaagccattctttacaggttcggcttcgttcaggataaattttctgcctctgcc
ttcagcttccctgcggaaaacaagccgcagtacatccacgtcacaggcacggtgttcatg
cagttgccgtactcgaagaggaagtacccgagcggtcagcagcgccgccgtcgtaactcc
gcctcctcggccagtcagagtctgtttggccccgacgagcacgtcggctaccactgggcc
tacaacaccatgctgaccaaagcgtggcgcaccggcgtcctgggagacgaaaagctggca
gagcgtctcctccgagacttcaccgacttctgctccaacaaggacaaccgtctcatgagc
ttctgggagaactgtgtagagaaaatgaattccagcgccccatga
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integrated database retrieval system
