KEGG   Tachysurus vachellii: 132863922
Entry
132863922         CDS       T09596                                 
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
tvc  Tachysurus vachellii
Pathway
tvc03082  ATP-dependent chromatin remodeling
tvc03083  Polycomb repressive complex
tvc04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    132863922 (rbbp4)
   03083 Polycomb repressive complex
    132863922 (rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    132863922 (rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tvc03036]
    132863922 (rbbp4)
Chromosome and associated proteins [BR:tvc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     132863922 (rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     132863922 (rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     132863922 (rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     132863922 (rbbp4)
    PRC2.2
     132863922 (rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     132863922 (rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    132863922 (rbbp4)
  Chromatin remodeling factors
   NuRD complex
    132863922 (rbbp4)
   NuRF complex
    132863922 (rbbp4)
   NuRF complex (fruit fly)
    132863922 (rbbp4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 132863922
NCBI-ProteinID: XP_060753000
LinkDB
Position
21:8621766..8627309
AA seq 424 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDTQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADT
EVQG
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcagataaagaagctgcttttgatgatgcggttgaggagcgggtgatcaatgaggag
tacaagatatggaagaaaaacacgccgttcctctacgacctggtgatgacccacgcactc
gagtggccgagtctcaccgcgcaatggctccctgatgtcaccaggcctgaggggaaagac
tacagtgtccatcggctggttctcggcacccacacctctgatgagcaaaaccacctggtc
attgccagcgttcagctgccaaatgatgatacccagtttgatgcctcacattacgacagt
gaaaaaggagagtttggtggctttggatcagtgagtggcaagattgagattgagatcaag
attaaccatgaaggagaagtgaaccgggcccgctacatgcctcaaaacccctgcatcatt
gccaccaagactccaaccagtgatgtgctggtctttgattacaccaaacacccatccaaa
ccagacccctctggagaatgcactcctgacctgcgattgagaggacatcagaaagagggc
tatggtctgtcatggaaccccaacttaagtggctgcctcctcagtgcctctgatgatcat
acgatctgtctgtgggatatcagcacagtacccaaggaagggaaaatagtcgatgctaag
accattttcactggtcacactgctgtggtggaggatgtgtcctggcaccttctgcatgaa
tcgctctttggatcagtagcagatgaccagaaactgatgatttgggatacacgctctaat
aacacatccaagcccagtcatgcagtagatgcacacactgcagaggtcaattgcctctca
ttcaatccttacagtgagttcatcctggctactggatctgctgacaagactgttgccttg
tgggatctcaggaaccttaagttgaagctgcattcctttgagtcacacaaagatgaaata
ttccaggttcagtggtcacctcataacgagaccatcctggcctctagtggaacagacaga
cgtctcaatgtttgggatctcagtaaaattggtgaggagcagtcaccagaagatgcagaa
gatggacctcctgaattactgttcatccatggtgggcacacagcaaagatctcagacttc
tcctggaaccccaatgagccatgggtgatctgctctgtgtctgaggacaacatcatgcaa
gtctggcagatggcagagaacatctacaatgatgaggaccctgaaggagcagcagacaca
gaggtccagggataa

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