Tachysurus vachellii: 132863972
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Entry
132863972 CDS
T09596
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
tvc
Tachysurus vachellii
Pathway
tvc04136
Autophagy - other
tvc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132863972 (wipi2)
04136 Autophagy - other
132863972 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132863972 (wipi2)
03029 Mitochondrial biogenesis [BR:
tvc03029
]
132863972 (wipi2)
Membrane trafficking [BR:
tvc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
132863972 (wipi2)
Mitochondrial biogenesis [BR:
tvc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
132863972 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_RSE1_2nd
DUF7165
Beta-prop_Vps41
Beta-prop_IFT140_1st
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
132863972
NCBI-ProteinID:
XP_060753070
LinkDB
All DBs
Position
21:5074191..5083709
Genome browser
AA seq
425 aa
AA seq
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MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQREKPQEEPTTWTGYFGKVLMASTTYLPAQVSEMFTQGR
AFATVRLPFSGHKNICALAIIQKIPRLLVAASDGYLYLYNLDPQEGGECTLMKQHKLDGS
AEPANEILEQTSHERPLVAQTYSTAIAKGYSEDQGAVGGAGVEDDMNALHLDEENEQPPL
ILETD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggagaggccggctgcagccagctgctcttcgccaacttt
aaccaggacaacacgtccttagcagttggtacgaaatctggatacaagtttttctctttg
tcatcggttgacaaattggagcagatttacgaatgtactgacacggaagatgtctgtatc
gtggaaagactgttttccagtagcctcgttgctatcgtgagccttaaggcacctcggaaa
ctcaaagtgtgccattttaagaagggaaccgagatctgtaactacagctactcgaacact
atactggctgtgaaactgaacagacagaggttgatagtatgtctggaggaatcactttat
atccacaacatcagggatatgaaagtactgcatacgattcgagagactcctcccaatccg
tcaggattgtgcgcactttcaatcagcaacgataactgctacctggcgtatcctggcagc
gcaacgataggtgaagtgcaggtctttgacactgttaatctgagggccgctaacatgatc
cccgctcacgacagcccgttagcagcactcgcttttgacgctagtggaacgaaactcgcc
acagcctccgagaagggaaccgtcattcgcgtgttctccattccagagggccagaagctg
tttgagttcaggaggggagtgaagcgatgtgtgagtatctgctccctggctttcagcatg
gaaggactttatctttctgcctctagcaacacagagacggttcatatctttaagctggag
acacagagagaaaagccacaggaggaacccacgacttggacaggatactttgggaaagtt
ctgatggcctccactacgtatctgcccgctcaggtgtccgagatgttcacacaaggtcgc
gccttcgctacggtcagactgccgttttcgggacacaagaacatctgcgctctagccata
atccagaagattccacgtctcttggtggcggcttcagacggctacctttacctgtataac
ctggacccacaggagggaggagaatgcacactgatgaagcagcacaagttagatggaagc
gctgaacctgcaaatgagattctagagcagacgtcccatgagcgcccgctagtggcccag
acctacagcactgccatcgccaaaggttactctgaggatcagggagcagtgggtggagct
ggcgtggaggacgacatgaacgccctgcacctggacgaagaaaacgagcagcctccatta
atcttggagacagactga
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