Tachysurus vachellii: 132863981
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Entry
132863981 CDS
T09596
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
tvc
Tachysurus vachellii
Pathway
tvc04514
Cell adhesion molecule (CAM) interaction
tvc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132863981 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132863981 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tvc00535
]
132863981 (sdc3)
Proteoglycans [BR:
tvc00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
132863981 (sdc3)
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Motif
Pfam:
Syndecan
LST2_mid
TGF_beta_GS
SDH8
Motif
Other DBs
NCBI-GeneID:
132863981
NCBI-ProteinID:
XP_060753089
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Position
21:complement(7758865..7788625)
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AA seq
462 aa
AA seq
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MKLPGWMAVALLLAHSVSTQRHSLRPVDQEGSGNDLYDDEDYFSGSGSGYPVMEIDLTEP
SASTPTKESLPVSTTQASGPAPSAPPAAEPSSTPAPEVDRESGMDNERELEMEMEKKREQ
QTEQEMERVREREREREREREREREREREREREREKERERERERERERERERDRERERER
EREREREREHEREKARERARSTTAPIVPKMTTDTLMIGNKTPSPNEDIVTTEEEDGLFIS
TETSPFESFSSEDLFTDDIVTQPTEVAPITIASTTTRPITTPATPSTAPPRSRKPHPVPS
ISPKRPRKPQSTASPATPTESTRPVPASTVQVKTPETDINNEVAVAGPSGDSEIREEDGR
RGNELGHGKGASDVGAEPDLTGNTIDTGSSAAQLPQKNILERKEVLIAVIVGGVVGALFA
AFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccgggctggatggctgtggcgctgctgctcgcgcactccgtgtcgacacag
cgtcactcattgcggccagtggatcaggagggctctggaaatgacctctatgatgatgag
gactatttctctggttcaggctcaggctatcctgtgatggagatagacttgactgaaccg
agtgcatctacccctacaaaagagtccctcccagtttcaaccacacaggcctctggaccc
gccccttcagccccacccgctgcagagcctagcagcaccccggcgccagaagtagacagg
gagagtggcatggataatgagagggaactggagatggagatggagaaaaagagagagcag
cagactgagcaggagatggagagggtgcgggagagggaaagagagcgggaaagggaaaga
gagcgggagagggagagagagcgagagagggagagggagcgagagaaggagagagagcga
gagagggagagagaaagagaaagggagagagaacgggatagagagagggagagagaaaga
gaaagagagagggagagagaacgtgaacatgaacgtgaaaaggcacgagagagggcaaga
agtacaactgcccccattgttccaaaaatgaccacagacactctaatgattggaaacaag
acccccagtcccaatgaggatatagtcaccactgaagaagaggatggtttgtttatttct
acagaaacctcccccttcgaatcattcagctcagaggacctcttcacagatgacatcgta
actcaacccactgaggtggctcccatcactattgcttccactacaactaggccaatcacg
actcctgccacacccagcaccgcccctcctcgatcacgaaaacctcatcctgttcccagt
atctctcctaaacgtccacggaaaccccaatctacagccagcccagccacacccactgaa
agtacacgcccagtgccagcttctacagtacaggtaaaaacaccagaaacagacattaat
aatgaagttgcagttgctggtcccagtggggactctgagatccgagaggaggatggacga
cgaggaaatgaattagggcatggcaaaggtgcttcggacgttggtgcagagcctgattta
actggcaacacaatagatacaggcagttcagctgctcagcttcctcagaaaaacatcttg
gaaagaaaagaagttttgatagctgtgattgttggaggtgtagttggcgcactgtttgct
gcattcctggtcatgttacttgtatatcgaatgaaaaagaaggatgaaggcagctacacc
ctggaggaacccaaacaagccacagtcacttatcagaaaccagacaagcaggaggaattc
tatgcctaa
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