Tachysurus vachellii: 132864157
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Entry
132864157 CDS
T09596
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132864157 (vps50)
Membrane trafficking [BR:
tvc04131
]
Protein recycling
Others
EARP complex
132864157 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
132864157
NCBI-ProteinID:
XP_060753421
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All DBs
Position
21:10685836..10813180
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AA seq
965 aa
AA seq
DB search
MQKIKSLMSRQGLKSPQESMADMSPVESFRVPSKEELRELREQPIDPQAEQEIIDSIDEV
YFSNDSIDMVQYELEKLPPDLNLQELEEYRDKLKKQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTTLQLAAVICTNARRQLAFAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKNFDVAHYTRVQLAYSLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYYRTMQWHEEHDKEEVKDADTD
GTSDEGSEEATVGHSYVKKKLEHGLSRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVI
SRLMQVGEEFCGSKSELLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFS
ITQLHEFKFMGQCRSPSVSPSRQPASSYSEELSLFAQYVQGGNPFEMQIDNKEEESEDVL
ASNGYESEELEKNVYQDYDSDSDVADELKQDFVDEQTGDIPNKSVSRETLRSRKRSDYSL
NKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDM
YESSGLGLISSRLRTTLNRIQESLIDMEAGGENAATHGSSEDRKEKVPSPHLSQLVVLTA
SSTLYGLAERVVATESLVFLAEQFELLQPHLDTMMPPAKKPFLQQFYSQTVSTASELRKP
TYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNVYVDVLLKEFEEFNKRLGDVSKQVQI
PLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPIPD
KEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAIDDI
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaattaaatctttaatgtcccggcagggtttgaaaagccctcaggagagtatg
gcagatatgagtcctgtggagagcttcagggtccctagcaaggaggagctgagggagctg
agggagcagcctattgatcctcaggctgagcaggagatcatcgacagcatagatgaggtg
tacttctccaacgactccattgacatggtgcagtacgagctggagaaacttcccccggat
ctgaacctgcaggagctagaagagtacagagataaactgaagaaacagcaagcagcagtt
tcaaaaaaggttgctgaccttattctagaaaaacagccatcgtatgttaaggaattggag
cgagtaacatccctgcaaaccacactgcagttggctgcagttatctgcaccaatgctcgg
aggcagcttgcttttgctaaagaaggcttcaccgaagcaagtcttgggctcctggccaac
cagagacgcaggcagctgctgacaggattgttaaagtctttaagaaccattaagacactg
caaaggactgatgttcgactgagtgagatgctggaggaggaggactatccaggtgcaatc
cagttgtgcttggaatgtcaaaaggctgccagcactttcaagcactacagctgcataagt
gagttgaactcaaagctgcaagacactctggaacaaattgaggagcagctggatgtagcg
ctgtcgaaaacatgcaagaactttgacgtcgctcactacaccagagttcagcttgcgtac
tcgctattgggcaagacacagacggctatggaccagcttcacatgcactttacccaggcc
attcacaacactgtgttccaggtggtactgggatatgtggagctgtgtgctggcaacgca
gacaccaaattccagaagatgcagtataaggatctgtgcacgcacatcaccccggacagc
tacatcccctgcctgactgacctgtgcaaggcattgtgggaagtgatgctcagttactac
cgaaccatgcagtggcatgaggagcatgacaaagaggaggtgaaggatgctgacacagat
ggtaccagtgatgaaggctcagaggaagctacagtgggccacagctatgtgaagaaaaag
cttgaacatggcctaagtcggatttggcaggacgtccagctgaaagtgaaagcctattta
ttggggacagacatgtccaacttcaagtatgatgactttattgtggtgctggatgttatt
agcaggctgatgcaggtgggagaggagttctgtggcagcaagtctgagctgctacaggag
tcaataaagagacagagcgtgaactactttaagaactatcacagaacacgcctggaggag
ttacgcatgtttctggagaatgaaacatgggagttgtgtcctgtgaagtccaacttcagt
atcactcagcttcatgagtttaagttcatgggtcagtgtcgttcgccgtcagtgtctccg
agcaggcagccagcctccagttactctgaggagctgtctctctttgcccagtatgttcag
ggtggaaacccttttgagatgcagatcgacaataaggaagaggagagtgaagatgtcctg
gcttccaatgggtacgagtctgaagagctggagaagaatgtatatcaggactatgacagt
gacagtgatgtggcagacgaactgaagcaggactttgtagatgagcagactggagacata
cccaacaagagcgtgtccagagagactctccgcagcagaaaaagatctgactacagtctg
aacaaagtcaacgcccccatcctgaccaacaccactcttaacgtgatccgtctggtcggt
aaatacatgcagatgatgaacattttaaaacccattgcatttgacgtcatccactgcgtg
tcacagctgttcgattattacctgtacgccgtgtacaccttcttcggccggaacgacatg
tatgaatcatccggactggggctgattagcagtagactgaggacgacactcaaccgcatc
caggagagtctcatagacatggaggcaggaggagagaacgcagccacccatggatcctct
gaggaccgaaaggagaaggtgccgagccctcacctgagccagctggtggttctgacagcc
agtagcacgctgtatggactggcagagcgtgtagtcgccacagagtcacttgtgttcctg
gcagagcagtttgagctcctccagcctcatctggacaccatgatgcctccagccaagaaa
cctttcctgcagcagttctactcccagacggtgtccacagccagcgagcttcgcaagccc
acttactggatagtggcagctaaagccattgattatgagcagatgctgctgctgatggca
ggagtgaaatgggacattaaagagataatgtcacagcacaacgtctatgtggatgtgctt
ttaaaggaatttgaggagttcaataaaaggcttggtgatgtttccaaacaagtgcagatc
cccctacctgtttcaaacgtcctctgggagcactgtatccgtctggctaaccgaacacta
gtggagggctatgctaatgtgaaaaaatgcagtaacgagggccgagcactgatgcagcta
gacttccagcagttcctcatgaagctggagaagctcaccgacctcagacctatcccagat
aaggagtttgtcgagacctacattaaagcctattacttgactgagaatgacatggagcag
tttattaagaaccacagggaatactccatgaagcagctggccaacctggtcaacgtctgc
ctcggctcccacatcaacaaaaaggccaggcagaaactcctggcagctattgatgacatt
gaccgtccaaaaagataa
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