Thalassomonas viridans: SG34_000530
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Entry
SG34_000530 CDS
T08831
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvd03021
]
SG34_000530 (rpoH)
Transcription machinery [BR:
tvd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SG34_000530 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
WDE05470
UniProt:
A0AAE9Z2K7
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All DBs
Position
110179..111042
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AA seq
287 aa
AA seq
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MSNISQSMALTVPQSGSIEAYMQSAYSIPMLSAEREHELATRLYESNDLHAAQELIMSHL
RFVIHIAKGYAGYGLPQADLVQEGNVGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVL
RNWRIVKVATTKAQRKLFFNLRKNKKRLGWFSNEEISTVADTLGVTEKDVIEMESRMSNQ
DQAFELSSDDDDSSASLGNFAPAQYLEDKQSDLATSVEDANWEDHANQRLSTALVALDER
SQDIIRTRWLNEDKSTLQELADKYQISAERVRQLEKNALGKLKSTMA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacatatcgcaatcaatggcactgaccgtcccccaaagcggtagcattgaagca
tacatgcagtcggcgtatagcatacctatgctcagcgctgagcgtgagcatgagctggca
actcgtctttatgaaagcaatgacctgcatgcagcccaggagctgatcatgtcgcattta
cgcttcgttattcatattgccaaaggttatgccggttatggcctgccgcaggcggatctg
gttcaggaaggcaatgtcggcctgatgaaggcggtgaagcgtttcaatcctgaagtgggt
gtgcgcctggtgtcttttgccgttcactggatcaaagcggaaattcacgaatatgtactg
cgcaactggcgtatcgtgaaggtggctaccaccaaagcccagcggaaactgttttttaac
ctgcgcaagaataaaaagcgccttggctggttcagcaatgaagaaatcagcacagtggcg
gatactctcggggtaaccgagaaagatgttatcgagatggaatctcgcatgagcaaccag
gaccaggcctttgaattgtcttcggacgatgatgacagcagcgccagcctggggaacttt
gccccggcacaatacctggaagacaaacagtcggatctggccaccagtgtcgaagatgcc
aactgggaagaccatgccaaccagcgtttatccacggcgctggtggcgttggacgagcgc
agccaggatattatccgtacccgctggttaaatgaagacaagtctaccttgcaggagctg
gcggacaaataccagatctcggcggaacgcgtcagacagctggaaaagaatgccctgggc
aaactgaagagtaccatggcttaa
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