Thalassomonas viridans: SG34_000675
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Entry
SG34_000675 CDS
T08831
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd03420
Nucleotide excision repair
tvd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SG34_000675 (uvrD)
03430 Mismatch repair
SG34_000675 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvd03400
]
SG34_000675 (uvrD)
Enzymes [BR:
tvd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SG34_000675 (uvrD)
DNA repair and recombination proteins [BR:
tvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SG34_000675 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SG34_000675 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
DUF7432
DEAD
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
WDE05497
UniProt:
A0AAE9Z392
LinkDB
All DBs
Position
138493..140670
Genome browser
AA seq
725 aa
AA seq
DB search
MDVSELLDGLNDQQREIVAAPLQNMLVLAGAGSGKTRVLVQRIAWLMKVEQASPHSILAV
TFTNKAAAEMRSRVEQVVEGNVHGMWVGTFHGLAHRLLRMHFQEANLPQAFQVLDSDDQL
RLVKRIIRSLNLDEKRWPAKQAQWYINGKKDDGIRPQHIDSQFDPTEQTFVQIYSAYQQA
CDRAGLVDFAELLLRAHELWLNNPVLLSHYQQRFAHILVDEFQDTNAIQYAWLTLLGKGR
SNVMIVGDDDQSIYGWRGAKIENIQRFLKDFDQAQTIRLEQNYRSTANILNAANKLIANN
NNRLGKELWTQDDAGEKISVYTAFNEIDEARFIAGRIEAWRQDNGSLDEVAILYRSNAQS
RLLEEALLQAQLPYRIYGGLRFFERQEIKDALAYLRLINNRDDDAAFERIINTPTRGIGN
QTLALVRDAARSLETTLWQACQQMLSGGQLKGRSAKAIGAFIELIDQLEDDSVNLDLDQQ
ANFVISHSGLKAMYQAEKGERAEARIENLNELVTACQTFEMDPELEEEQSLLTAFLTHAA
LESGESQADDYEAAVQLMTMHSAKGLEFPLVFIAGIEEGMFPSQQSVEDISRLEEERRLC
YVGMTRAMNKLYLCHAESRRLYGQEKYHKPSRFIRELPESCIEEIRLQSQVSRPATTGRF
SSTFTTESFENTGFTLGQRVLHAKFGEGVVLNYEGSGAQSRIQVNFDGLGSKWLVVAYAN
LQPIT
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttccgagttacttgacggcttaaacgaccagcagcgggaaatcgtcgctgcc
cctttacagaacatgctggtgcttgccggagccggtagcggtaaaacccgggtgctggtg
cagcgcattgcctggctgatgaaggtcgagcaggcctctccccacagcattttagcggta
acctttaccaataaggcggcggcggaaatgcgctcccgggtcgaacaggtggttgagggc
aatgtccacggcatgtgggtgggcacgttccatggcctggcccaccgtttgttgcggatg
catttccaggaagccaacttgccccaggccttccaggtactcgactccgacgatcaactg
cgcctggtcaagcgcatcatccgttccctgaacctggatgaaaagcgctggcccgccaaa
caggcgcagtggtatatcaacggcaaaaaagatgacggcatcaggccccagcatatcgac
agccagtttgatccgacagagcagacttttgtacagatttacagcgcctaccagcaggcc
tgcgaccgcgccggtttagtggactttgccgaactcctgttgcgggcccatgagctctgg
ctcaataatccggtacttttgagccattaccagcaaaggtttgcccatatcctggtggac
gaattccaggataccaatgccatccagtatgcctggctgaccctgctgggcaaggggcgc
agcaatgtgatgatagtcggcgacgacgatcagtccatctatggctggcgcggggcaaaa
atcgagaatatccagcgctttttaaaggacttcgatcaggcgcagaccatacgcctggag
caaaactaccgctccaccgccaatatcctcaatgccgccaacaagcttattgccaacaac
aataaccgtttaggtaaagagctgtggacccaggacgatgccggtgaaaagatctccgtg
tataccgcctttaacgaaatcgatgaagcccgctttattgccgggcgtatcgaggcgtgg
cggcaagacaacggctccctcgatgaggtggcgattttataccgcagcaatgcccagtcc
cgtctgctggaggaagccctgctgcaggcgcaattgccgtaccgcatttatggcggttta
aggttcttcgaacgccaggaaatcaaggatgccctggcctatttacgtttgatcaacaac
cgggacgacgacgccgcctttgagcgtattatcaatacccccacccggggcataggcaac
cagaccctggcgcttgtccgggatgccgccaggagcctggaaaccactttgtggcaggca
tgtcagcaaatgctgtccggcggccagctcaagggtcgaagcgcgaaagccataggggcg
tttattgaattgatcgaccagctggaagacgactccgttaacctggatctggatcagcag
gccaactttgttatcagccacagcggcctgaaggccatgtaccaggcggaaaaaggcgaa
cgcgccgaagccaggatagaaaacctcaatgagctggtgaccgcctgccagacctttgaa
atggatcctgagctggaagaagagcaaagcctgctgacggcgtttttaacccatgcggcg
ctggagtccggggagtctcaggcggacgattatgaagccgcggtgcagctgatgaccatg
cactccgccaaggggctggaatttccgctggtgtttattgccggtatagaagaaggcatg
tttccgtcccagcagtcggtggaagacattagccggctggaagaagagcgccgcctgtgt
tacgttggcatgacaagggcaatgaacaaactatacttatgtcatgccgagagccggcgg
ctgtacgggcaggaaaaatatcataagcccagccgttttatccgggaattacctgagtct
tgcatcgaagaaatccgtttgcaaagccaggtgtcccgtccggcgacaacggggcgtttt
tcatcgacttttacgaccgaatcttttgaaaataccggctttaccttgggccagcgggta
ctgcatgccaagtttggcgaaggtgttgtgttaaattacgagggcagcggcgcgcaaagc
cgtatccaggtgaattttgacggtttgggcagtaaatggctggtggtcgcctatgcgaat
ttacaaccaataacataa
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integrated database retrieval system
