Thalassomonas viridans: SG34_000770
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Entry
SG34_000770 CDS
T08831
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SG34_000770 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvd03019
]
SG34_000770 (recQ)
03400 DNA repair and recombination proteins [BR:
tvd03400
]
SG34_000770 (recQ)
Enzymes [BR:
tvd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SG34_000770 (recQ)
Messenger RNA biogenesis [BR:
tvd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SG34_000770 (recQ)
DNA repair and recombination proteins [BR:
tvd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SG34_000770 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WDE05515
UniProt:
A0AAE9Z2N7
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All DBs
Position
163009..164820
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AA seq
603 aa
AA seq
DB search
MNTPSPVTVKEQLLATLKHHFGYQSFRPGQEAIILNLLQKRDSLVLMPTGGGKSMCYQLP
AVMLPGVTIVISPLIALMKDQVDSLTRQGIAAAYVNSSLDQQTINGIFRRLGNNEIKLLY
VAPERLTQGYFLQGLAELNISLFAIDEAHCISQWGHDFRPAYTRLGCLKASFPHVPVMAL
TATADVTTRKDILEQLALQDPYIHLDSFDRPNIRFTLAEKYDGDQQLLGYIRKRSEECGI
VYCNSRWQVEKLAKFLAEKGVNCAAYHAGMEAEIRNTVQEGFTKDNIQVVVATVAFGLGI
NKPNVRFVIHFEPPKTLEGYYQEIGRAGRDGLAAEALFLYDDQDIGRIKKRISQGENEQR
VNVELQRFQAMAGFVEAQTCRRQVVLNYFAEFTEQGCGNCDICLDPPSLFDATEAAQKVL
SCVYRIKEQGDIQYVIEVLRGQNTPKIMKAVHNKVSTFGIGSSKTPGYWFSIIRQLIHLG
YLQQDIARQSSLCLTEAARSVLKAQEPLMLASPRLQQASYWQHKQQEKQYDRALFAKLRS
LRKEIADAEDIAPFIVFNDATLSELARIQPKTSRAMLNISGIGDVKLARYGKPFLDLIQE
HSG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
ttgaataccccatcccctgttacggtaaaagagcagttacttgctaccttaaaacatcat
tttggttatcagtcgttccgtcccggacaggaagcgatcatactgaatttgctgcaaaag
cgggatagcctggtgctgatgcccaccggcggcggcaagtccatgtgctaccagctgccg
gcggtgatgctgccgggggtgactatcgttatctcgcccctgatcgccctgatgaaagac
caggtggacagcctgacccgacagggtattgccgcggcttatgtcaattccagcctggat
cagcaaaccatcaacggcattttccggcgcctgggcaataatgaaatcaaactgctctat
gtggcgccggagcgcctgacccaggggtatttcctgcaggggctggcggagctaaatatc
agtttatttgccatagatgaagcccattgtatttcccagtggggccatgacttcaggccg
gcctataccaggctcggctgcctgaaagcctcatttccccatgtgcctgtgatggcgctg
accgcaaccgccgatgttaccacccgcaaggatattcttgagcagctggcgctgcaggat
ccctatatccatctcgacagctttgaccgccccaatatccgtttcaccctggcggaaaaa
tatgacggcgaccagcagctgttgggttatatacgcaaaaggagtgaagagtgcggcatc
gtttattgcaacagccgctggcaggtggaaaagctggccaagtttttagcggaaaaaggc
gttaactgcgccgcctaccatgcggggatggaagcggagatccgcaatacggttcaggaa
ggttttaccaaggacaatatccaggtggtggtggcgaccgtggcttttggtctgggcatc
aataaacccaacgtgcgttttgtgatccacttcgagccgccgaaaaccctggaaggctat
tatcaggagatcggccgcgcaggccgggacggcctggcggcggaagccctgtttttatac
gatgaccaggatatcggccgcataaaaaaacgtatttcccagggagaaaacgaacaaagg
gtgaatgtcgagctgcaacgtttccaggctatggcgggttttgttgaggcgcaaacctgc
cgccgccaggtggtattgaattattttgccgaatttaccgagcaggggtgcggcaactgc
gatatctgtctggatccccccagtttgttcgatgccaccgaagcggcccagaaggtgttg
tcctgcgtataccgcattaaggagcagggagacatccagtatgtgatcgaagtgctgcgc
gggcaaaataccccgaaaatcatgaaggcggttcataataaggtgtccacctttggcatc
ggcagcagcaaaaccccgggttactggttctccattatccgccagctgatccatttggga
tacctgcagcaggacattgcccgccagtcttccctttgcttaacggaagcggcccgttcg
gtattaaaggcgcaggagccgctgatgctggccagcccgagattgcagcaggccagctac
tggcagcacaaacaacaggagaagcagtatgatcgcgccctgtttgccaagttgcggtca
ctgcgtaaagagattgctgacgccgaggatatcgcgccctttatcgtctttaatgacgcc
accttatccgagctggcccgtatccagcctaaaaccagccgcgccatgctcaatatcagc
ggcataggggatgtcaagctggcacgttacggtaagcctttcctggatttgatccaggag
cacagcggttaa
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