Thalassomonas viridans: SG34_001655
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Entry
SG34_001655 CDS
T08831
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SG34_001655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvd03000
]
SG34_001655
03400 DNA repair and recombination proteins [BR:
tvd03400
]
SG34_001655
Enzymes [BR:
tvd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SG34_001655
Transcription factors [BR:
tvd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SG34_001655
DNA repair and recombination proteins [BR:
tvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SG34_001655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
ACT_4
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WDE05674
UniProt:
A0AAE9Z422
LinkDB
All DBs
Position
360159..361523
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AA seq
454 aa
AA seq
DB search
MLNPEICQKARFSRDPRFDGKFFTAVKTTGIFCRTTCPVSPPKEENVCYYATAIEAANAG
FRPCLRCRPDSAPGSPAWKGVNTTLERAIKLIDEGALQSGDLPALAERLGISDRYLRELF
KKHLGTSPKTYAQYQQCLFAKQLLQQTKLPVTQVALASGFSSIRRFNDCFLNQLKLTPSK
MRKSVEETTNSLQLKLYYRPPYNWSQMSAFLMARAIPGLEWCGEHSYGRMFEWAGTRGCF
TAKHVSENFRFDVTIEVDDVRHLKAIVNNIRRILDLDVDMQMVEQDLARSCPDDFTVKEG
IRLPGIWSMFEAGIRAILGQQISVTAARNLVTVLVHSLGESSGGKHFFPIPEAIADNELD
CLKIPGSRKQTLRNLARHYLDSDNSDDASAWLKLKGIGPWTVDYARLRGLSEPDIFLGGD
LGVKKAMGKSAQTLKPEQASPWRSYLTFQLWSLL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaccctgaaatttgtcaaaaggcccgtttttcccgggatccgcgatttgacggc
aaattttttaccgcagtaaaaaccacggggattttttgccgcaccacttgccccgtatca
ccccctaaagaagagaatgtctgttactacgctaccgccattgaagcggccaatgcaggc
tttcgtccttgtctgcgctgccgccccgacagtgcgccgggttctccggcatggaaaggg
gtgaataccacgttagagcgggccattaagctgattgacgaaggagcattgcaaagcggg
gatttacctgcactggcggagcggctcgggatcagcgacagatacctgagggagttgttt
aaaaagcatttgggcacgtcgccgaaaacctatgcccagtaccagcaatgcctgtttgcc
aaacaattgttgcagcaaaccaagctgccggtaacgcaagtggcgctggccagcggcttc
agcagtatccgccgttttaacgattgttttttaaaccagttgaaattaacaccgtcaaaa
atgcgtaagtcggttgaggaaaccactaacagtttgcagctcaaactgtattaccggccg
ccgtataactggagccaaatgtcggcttttttgatggccagggccattcccggtttggag
tggtgcggtgagcacagttatggccgtatgtttgaatgggcaggcacccggggttgtttt
acggctaaacatgtcagtgaaaatttcaggtttgatgtcactattgaagtggatgatgtc
aggcacttaaaggcaatcgtcaataatatccgccgtatcttagatctggatgtggatatg
cagatggtggagcaggatctggcccggagctgccccgatgatttcaccgttaaagaaggc
atccgcctgccggggatctggagcatgtttgaagcggggattagggcgattttaggtcag
cagatttccgtgactgcggcacgtaacctggtgacggttctggtgcactccctgggggag
agtagcggcggcaaacacttttttccgatacccgaggccattgccgataacgagctggat
tgcctgaaaataccgggttcacgtaaacaaacgctacgtaatcttgcccgccattacctg
gacagcgataactcggatgacgcatctgcctggctcaagcttaagggcataggtccgtgg
acggtagattatgccaggctcaggggcttaagcgagccggatatttttctcggcggcgac
ctgggcgtgaagaaagccatggggaaaagtgcgcaaacgctgaagccggaacaggcttcc
ccctggcgcagttatttaacttttcaattatggagcttgctctga
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