Thalassomonas viridans: SG34_003270
Help
Entry
SG34_003270 CDS
T08831
Name
(GenBank) tandem-95 repeat protein
Organism
tvd
Thalassomonas viridans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
Calx-beta
K319L-like_PKD
HYR
Motif
Other DBs
NCBI-ProteinID:
WDE05965
UniProt:
A0AAE9Z3J0
LinkDB
All DBs
Position
736884..744005
Genome browser
AA seq
2373 aa
AA seq
DB search
MDNNNKIFRKHKLDKALKASLPFFALLGGNAVASSRFAGIGSASRRVPGTAIVHVDSPNG
AVELTEKAQKRTGKKAGAFGAFTKRQKKPVQQAQIKVNEAALTFLQSNELLKPGKEALSS
LSGNTLSGRGNKTFAAPGPGYCGVVTAHQRLHDNKGDCVADGKVWQYTSSGVCSQNPGVY
TNAKLCLLSSYAWNNANIVGTYNGADATPPSFENGTPSLGSITGTGATVSADLDEDGTVY
YVVVADGAAAPSVSEVKAGTGSGGSGQLAAGNFTTSGTTGSEAFSGLSDLTAYDLYAVAE
DDEGTPNVQASVTKVDFTTIDGTAPVFENSTPSIGSITGTGATLSVDLDEEGSAYYVVVA
DGAAAPSVSEVKAGTGSGGSGQLAAGNFTTSGTTGSDAFSGLSGSTAYDVYVVAQDDEGT
PNVQASVTKVDFTTADVSAPVFENSTPSVGTITGTGATVSADLDEDGTVYYVVVADGAAA
PSAAEVKAGTGNGGSGQLAAGNFATSGTTGSEAFSGLAGDTAFDLYVVAEDGVPNLQASA
TKVDFNTLDVTAPVITAVTIPDSDHKNGDMVTATITVASDGDDYTGGSGGINGSGGSGNA
TINGFALGGLTRVSDTTYTATFTVGAGTDVAAGSDIAVSITLDDSSGNTSADFTTAISQA
SDAIYANLPDVNLTADTNTIAEDGGVSTLTATLSGSLNNQWPTAITVNLAYTGTGTAGTD
YSKSDSIVISAGNSSNTATVTGIADTLYDAASAETAIVDIDSLSEGNEGGTSQQTITITD
AESAPTVDLTVGNASVNENGGTSTITATLSHQTYDTTVVNLSYSGTAVGGGTDYNTPSSS
ITINANSLTANAATGITAVDDGSSDGNQTIVIDVASVTGSASENGTQQQTVTIIDDEDGV
APTITGVSIPDSVHKNGDSVTATITVASDADDYSTGSGAVTGNINGFALGSLTKVSDTSY
TATFTVASGTDIAAGDDVPVNFTLTDSSGNVSANYTTAISQASDTIYANLPDIDLTADTN
TIAEDGGVATLTATLSGSLNNQWPVDINVGLAYTGTGTADTDYSKSDTITITAGNSTGMA
TVTGTADTIFDAASNETAIVDIDTLSAGNEGTTNQQTITITDAEVAPVVTLSTGAVVVVE
NGGTAAVTATLNNPTYADVTVNLAYSGDATSGGVDYNTPSSSITITAGNTSANAVTGITG
VDDGDTEAFETIVIDIASVSGGSASENATQQETVIINDDETIPVVSLSSSTATLAEDGGS
STLTATLDQVTFEDVTVNLAYSGTATSGSDYAAPAASITISAGQLAGSTTLTATDDSTDE
DDETIVVDISSVSGGNSIENGTQSESLTITDDDTDSTTPTPDPDPEPETALASLSVSPAS
IAENNGSSTVSVSLDQAISEAVTISLSYSGTASSGSDYQAPAGSVTIAAGETFASLALTA
IADNEVEGNETVVIDISGVSGTIVSENGAQQQTVTITDSSSVIATAPDSAGLDEDASVAI
NVLANDSIEGSSFDIGTVTVVASAEHGTTAVDNESGAITYTPETDYNGSDSFSYTVSDLA
GNRSEATLVTVNVAPVNDAPVAVDDLVTREDWQSLTLDVLANDSDVDGDELKIIGAVTDL
GDVSFTDTEITFTPAGGFAGMVFLDYVISDGNEEASARVQIDMLASDDDLPVITLPADVE
VNADALLTKVDLGVAEAVDSQGNVIPVSLEDGITFFKPGINTVVWQASDSEGRSASASQL
VKVHPLISLDKDQTVTEGATVTVGIRLNGESPLYPLEIPYTVSGSAESGLDHDLETGTVI
ISSGTSGVITFNVLSDAVAEVDETLVVELGSALNRGSKFSQQITITEENVAPKVSLRVEQ
AGETRFVVNREDGTVTVSSDVSHPDAANQYTYAWSNSQQQLIDTDSSDTSFSFDPSGLAA
GVYHLELTVTDADDTAYSGSDKVTLRLDAASIVLGNEDTDKDGIADNIEGLDDDDNDGIP
DYLDTISECNVVPEQLDTADNFLVEGDPGVCLRLGDTALTGSSGGTRLLEQDVNDEEVVN
VGGIFDFIAYGLPVEGQQYRVVLPQIQPIPANAVYRKQRSDGTWTNFVQDSGNQLWSTQG
ESGFCPPPGDERWQAGLIEGYWCVQLEMKDGGANDADGIANGTIVDPGGVAVMLDNNQQP
QAQDDNVETRLNTALTIDVLANDSDADGDSLEITSANATFGTVTIEENQLHYQPPEDYFG
EDTLIYGISDNQGGSASATLTVRVLANESPVAVNDTVGIISGKSLTLYVLSNDTDAEGDI
LELVSATAELGDVSVNADGTLTYSAPASFIGTDTVTYVIRDSFGAQAQGTVTVTVVEERI
YTGGTGRKRSGGAAFYLLLLAVAALGWRRAIKP
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atggacaataataacaagatattccgaaaacataagctggataaagcccttaaagcaagc
ttgcccttctttgccctgttagggggcaatgcggtggcatcgagccgttttgccggtatc
ggctccgccagccggcgcgtgcccggcacggcaatcgtgcatgtcgacagcccaaacggg
gcggtggagctgacggaaaaagcccaaaagcgtacgggcaaaaaagccggtgcctttggc
gcctttaccaagcgacaaaaaaagccggtgcagcaggcgcaaatcaaggtcaatgaggcc
gcgctgacttttttgcaaagcaatgagctgttaaagcccgggaaagaagccttaagtagc
ctgagcggtaataccctatccggcaggggcaacaaaacttttgccgcccccggcccggga
tattgcggggtcgtcaccgcccatcagcgccttcatgacaataaaggcgactgtgtcgcc
gacgggaaagtctggcaatacacttcaagcggggtatgttcgcaaaaccccggggtctat
accaatgccaaattgtgtctgctcagcagttatgcctggaataatgccaatattgtcggc
acttataacggggcagatgccacgccgccatcttttgaaaatgggactccctcgttaggc
tccattactggcaccggggcaacggtttctgccgatctcgatgaagacggtaccgtttat
tatgtggtggttgccgacggcgctgcggcgccgagtgtttccgaggtcaaggcgggcacc
ggcagcggcggcagcgggcaattggcggcgggcaactttaccacctcaggtacgaccggc
agcgaagcttttagcggtttgtcagatctgaccgcttatgatctttatgcggtagccgag
gatgacgaaggcacaccgaacgtccaggcaagcgtgactaaagtcgactttaccacgata
gacggcacagcgccggtttttgaaaacagcacgccgtctataggctctattaccggcaca
ggtgcgaccttgtcggtggatctcgatgaagaaggcagtgcctactatgtggtggtggca
gacggcgcggcagcaccgagcgtctccgaggtcaaggcgggcaccggcagtggcggctcg
ggccagctggcggcggggaattttaccacttcgggcacgactggaagcgatgccttcagc
ggcttatccggttctaccgcttatgatgtttatgtcgtagcccaggacgatgaaggtacg
ccgaacgtccaggcgagtgtcactaaagtggactttactacggcagatgttagcgcgcct
gtttttgaaaacagtacgccttctgtcggcaccattaccggcacaggagccacggtttcg
gcagatctcgatgaagacggcaccgtttattatgtggtggtggccgacggcgcggcagcg
ccgagtgccgccgaggttaaggcaggcacaggcaacggcggctcaggccagctggcggcg
ggcaattttgcgacctcaggcacgactggcagcgaagcctttagcggtttagccggcgat
accgcctttgatctttatgtggtggccgaagacggtgttcccaatcttcaggcttcggcc
acgaaagtggactttaacaccctggatgtgacggcccctgttattaccgcggtgacgatt
ccggacagcgatcataaaaatggcgacatggttaccgcgaccattaccgtggcctcggac
ggggatgattataccggcggtagcggcggcattaatggcagcggcggcagcggcaatgcc
accattaacggttttgccctgggcggcttaacaagagtaagtgataccacttataccgca
acctttaccgtaggggccggtacggatgtcgccgctggttccgatattgcggtaagcatt
accctggatgacagctccggcaataccagcgccgactttaccaccgccatcagccaggca
agcgatgccatttatgccaatttaccggatgtaaatttaaccgcagacaccaatacaatt
gctgaagacggcggagtttcgaccttaaccgccaccctaagcggcagcttaaataaccag
tggccgacggcgatcaccgtaaacctggcctatacaggtacgggaacggcggggacggat
tatagcaaatcagacagtatagtaatctctgcgggcaacagcagcaataccgccacggtt
accggcatcgccgataccttgtatgatgccgccagcgccgagaccgccattgtcgatatc
gactctttatccgagggtaacgaaggcggcaccagccagcaaaccattaccattaccgat
gccgaatctgcgcctacggtggatttaaccgtcggcaatgcctcggtcaatgaaaatggc
ggtacctctaccatcactgcgaccttaagccatcaaacctacgacacgactgtggtgaac
ttgagctatagcggtacggccgttggcggcggtaccgattataataccccgagttcttcc
attaccatcaatgccaacagcctgaccgccaatgcagctaccggcatcaccgcagtggat
gacggcagttcggacggtaaccagaccatagtgatagatgtcgcttcggtgaccggcagt
gccagcgaaaacggcactcagcagcagacggtgactattatcgacgatgaagacggggtt
gcgccgaccattactggcgtatctatccccgacagtgtccataaaaacggcgacagcgtc
actgctactatcacagtggcttctgatgccgatgattacagcaccggcagtggcgccgtt
accggcaatatcaacggttttgccttgggcagtttaacgaaagtcagcgataccagctat
accgcaacctttaccgtggcatcaggcactgatattgcggcgggggacgatgtcccggtg
aactttaccctgaccgacagcagcggcaatgtcagcgcgaattatactaccgctatcagc
caggcaagcgataccatatacgccaacttgccggatatcgatttaaccgccgataccaat
accatagccgaggatggcggcgttgctacgttaacggcgaccttaagcggcagtcttaac
aatcagtggccggtggatatcaatgttggccttgcctataccgggacaggtactgccgat
acggattacagcaagtctgataccattaccattactgccggtaacagcacaggtatggcg
acggtgaccggcacagccgataccatcttcgatgccgccagcaatgagacggcgatagtc
gatatcgataccctgtcggcaggtaatgaaggtaccaccaaccagcaaaccattaccatt
accgatgccgaagtggcgccagtggtcaccttaagtacaggtgcagtggtagtggttgaa
aacggcggcactgccgctgtgactgcgaccctgaacaatccaacttatgccgatgtgacc
gtcaaccttgcttatagcggcgatgccaccagcggcggtgtcgactacaataccccgagc
agtagtattaccattaccgcaggcaatacttcagccaatgccgttaccggtattaccggc
gtagatgacggcgataccgaagcttttgaaacgattgtcatcgacattgcttcggtcagc
ggcggcagcgctagcgagaatgcgacccagcaggaaaccgtgatcatcaacgatgatgaa
accattcctgtggtgagcttaagctccagcacagcgactttggccgaagatggcggcagc
tcgaccctgacggccactttggatcaggtaacgttcgaagatgtgacggttaatttagcc
tatagcggtacggcaactagcggcagtgattatgctgcgccggcagccagcatcaccatc
agcgcggggcaattagcaggctcgactacgttgacggccaccgacgacagcacagatgaa
gacgatgaaactatcgttgtcgatatcagcagcgtcagcggcggcaacagtatcgaaaac
ggcactcagagcgaaagcctgaccattaccgatgatgatactgacagtacaacgccgacg
ccggacccagatcctgagccggaaaccgcccttgccagtttgtcggtgagtccggcatcg
atagcagaaaacaacggcagcagcacggtttcggtcagtctggatcaggccatcagtgaa
gccgtgaccatttctctttcttatagcggcacggcaagcagtggcagtgattaccaggcg
ccggccggttcggtgacgattgccgcgggcgaaacttttgcttcgctggccttaacggcg
atcgccgataatgaggttgagggtaatgaaaccgtcgttattgacatttcaggcgtcagc
ggcactatcgtcagtgaaaatggcgctcagcagcaaaccgtcaccattaccgacagcagt
agtgtcattgcaaccgctccagatagcgcaggactggatgaagatgccagtgtcgccatt
aacgtgctggccaatgacagtatagaaggcagcagctttgatatcggcacggttactgtg
gtggcctctgccgaacacggcacgacagccgtggataacgaaagcggcgccattacctat
accccggaaactgactataacggcagcgacagtttcagctataccgttagcgaccttgcg
ggcaaccggagtgaagccaccctggtaacggtaaatgttgcccctgtcaacgatgccccg
gtggcggtcgatgaccttgtgacccgagaagactggcagtcgctgaccttggacgtgttg
gccaatgacagcgatgtggacggcgacgagctgaaaattatcggtgcggtgaccgatctg
ggggatgtcagctttaccgataccgagatcacctttacccccgcaggcggttttgccggc
atggtgttccttgattatgttatcagcgacggcaacgaagaagcttctgcccgggtacag
atagatatgctggcgtccgatgacgatctgccggtgatcactttgccggcagatgtggaa
gtcaatgccgacgccctgctaaccaaggtcgatttaggggtggcggaagccgtcgacagc
cagggcaatgtcatcccggtttccctggaagacggtattaccttctttaaacccggtatc
aataccgtggtttggcaggccagcgacagcgaaggacgtagcgccagtgccagtcagctg
gtgaaagtgcatccgctgatctccctggataaagatcaaacggtcaccgaaggggccaca
gttaccgtaggtatccgcctcaatggcgaatcgccgctgtatccgctggaaatcccgtat
acggtgtccggctcggcagaatccggcctggatcatgacttggaaaccggcactgtcatc
attagctccggcaccagcggcgtcataacttttaacgtattatccgatgcggttgcagaa
gtcgatgaaaccctggtggtagagcttggcagcgctcttaaccgcggcagtaaattcagc
cagcagatcactatcaccgaagagaatgtcgcgcctaaggtcagcctgagggttgagcag
gctggtgaaacccgctttgtggtcaaccgagaggatggtacagtgacggtcagctcggat
gttagccatccggatgccgctaaccaatatacctatgcctggtccaacagccagcagcag
cttatcgataccgacagcagcgataccagtttcagctttgatcccagtgggcttgccgcc
ggtgtctaccacctggaactgacggtaaccgatgccgacgataccgcctacagcggctcc
gataaggtcaccctacgattggatgccgccagcatagtgttgggcaatgaagatactgac
aaggacggtattgctgacaatatcgaaggcctggatgatgacgacaacgacggtattccc
gattacctggatactatcagtgaatgtaacgtagtgcctgagcaactggacacggccgat
aatttcctggtggaaggcgatcccggcgtatgtctgcgtctgggagacaccgcgttgacc
ggctcttcaggcggcacccgtttgcttgaacaggatgttaatgacgaggaagtggtgaat
gtcggcggtatctttgactttatcgcttatggtttgccggtggaaggccagcaataccgg
gtggtgttacctcagatacagcctattcccgccaatgccgtttaccgcaaacagcgcagc
gacggcacctggaccaactttgtccaggacagtggcaaccagctatggtcgacccaggga
gagtctggtttctgccctccgccgggggatgagagatggcaggcagggctgattgaaggc
tactggtgtgtgcagctggagatgaaagacggcggtgccaacgatgccgacggtattgcc
aacggtactattgttgacccgggcggcgtggcggttatgctggataacaaccagcagccg
caggcgcaggatgacaatgttgaaacccgccttaatacggcgttaaccatagatgtcctg
gccaatgacagcgatgctgacggcgacagcctggagatcacttctgccaatgcaaccttt
ggcaccgtgaccatagaagaaaaccagctgcattatcagccgccggaagattacttcggg
gaagataccctgatatacggtatcagcgataaccaggggggctcggcttcggcaaccctg
acggtgagggtgctggcaaatgaaagtccggtagcggttaatgataccgtcggtattatt
agcggcaagagcctgactttgtatgtgctgagcaacgacactgatgccgaaggcgatatc
ctggagctggtgtcggcaacggctgagcttggtgatgtcagtgttaatgccgacggcacc
ttaacttacagcgccccggccagctttatcggcaccgataccgtgacttatgtgatccgt
gacagttttggtgctcaggcccagggcacagtaacggtaactgtggtagaggagcgtata
tataccggcggaacagggcgcaagagatccggtggggctgctttttacctgttgctgttg
gctgttgccgccctgggttggcgcagggcaattaagccttaa
DBGET
integrated database retrieval system