Thalassomonas viridans: SG34_005135
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Entry
SG34_005135 CDS
T08831
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvd03016
]
SG34_005135
Enzymes [BR:
tvd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SG34_005135
Transfer RNA biogenesis [BR:
tvd03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SG34_005135
Prokaryotic type
SG34_005135
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GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
WDE06311
UniProt:
A0AAE9Z3U5
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All DBs
Position
1187662..1188621
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AA seq
319 aa
AA seq
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MELLFLGTSSGTPTKARNVSATAIKVPNAKSWCLVDCGEGTQHQVLRTNLSLNSLQAIFI
THVHGDHSYGLPGLLASAAMAGRQDKLYLVGPPQIEALINAVCTLTDLYLPYELVFIDSA
RLNDCPPDLDLGVSAIKLSHRVPSHAFSFSYQAHERKLDIDKLKRAGIRPGPHWGELQKG
RNVELDGKLLIADDYLLPAPQARKIIICGDNDTPDLLSDEVKNANVVVHEATYTYDIAQK
VGSGPMHSSAKIVAEFAGEHQVDNLVLTHFSARYQNDGSKSPSIFDIEQEARKYYSGNLV
LAQDFDGYRLDKNGVLTKL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaattattatttttaggtacctcatcaggtactcccacaaaagccaggaacgtgtcg
gcaacggcgataaaagtcccgaatgccaaaagttggtgtctggttgattgcggtgagggc
acccagcaccaggttttaaggaccaacttgtctttaaacagtttgcaggcgatttttatc
acccatgtgcacggggatcacagctatggtttgcccggtttgctggcaagcgccgccatg
gccgggcgacaggacaagttatacctggtgggcccgccacagatagaggccctgattaac
gccgtttgcaccctgaccgatttatacctgccttatgagctggtgtttatcgattctgcc
aggcttaatgattgcccgccggatttggacctgggggttagtgcaattaaattatcgcac
cgggtgccgtcgcatgcgttcagtttcagttaccaggcccacgagcgcaagctggatatt
gataaattaaagcgtgccggtatcaggcccggtcctcattggggcgagttgcaaaaaggc
aggaatgtcgagctcgacggcaagctgcttattgcagatgattatctgttgccggcgccg
caagcccggaagattattatctgcggcgataatgatacgccggacttactgtcggatgag
gtgaaaaacgccaatgtcgtagtgcatgaggcaacctacacctatgatatcgcgcagaag
gtgggcagtgggcctatgcacagcagcgcaaaaattgtcgctgaatttgccggtgaacat
caggtagataatctggtgctgacgcatttcagcgcccgctatcaaaatgatggctcaaag
agcccttctatttttgatattgaacaggaagccagaaaatattatagcggcaaccttgta
ctcgcccaggattttgacggctacaggctggataaaaatggtgtacttaccaagctttaa
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