Thalassomonas viridans: SG34_005385
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Entry
SG34_005385 CDS
T08831
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SG34_005385 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tvd01007
]
SG34_005385 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvd03016
]
SG34_005385 (lysS)
Enzymes [BR:
tvd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SG34_005385 (lysS)
Amino acid related enzymes [BR:
tvd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SG34_005385 (lysS)
Transfer RNA biogenesis [BR:
tvd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SG34_005385 (lysS)
Prokaryotic type
Other AARSs
SG34_005385 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
GNC1_N
Motif
Other DBs
NCBI-ProteinID:
WDE06356
UniProt:
A0AAE9Z3X2
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All DBs
Position
1238318..1239865
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AA seq
515 aa
AA seq
DB search
MTEQVKAPQDENKLIAERRGKLAQIRENCPANGHPNQFERKHYANDLQSAHGEKDKETLE
AETEVYSIAGRVMAKRGPFLVLQDMTGRIQAYADKNVQKDIKARWGVLDVGDIVGVSGTL
HKSGKGDLYVNMDQYQLLTKSLRPLPEKYHGLSDQETKYRQRYVDLMINEETRNTFKVRS
KVVEGIRNFLAQRDYMEVETPMLQVIPGGATAKPFMTYHNSLDIDMYLRIAPELYLKRLV
VGGFERVFEINRNFRNEGLSTRHNPEFTMIEFYQAYADYEDMMNLTEEMLRTVAQDVLGT
TMIRNTEKDENGEVISEVFYDFGQPFERLSMVDAILKHAPELDESILRNPEENLEALKLM
ALKVGVKLSDASLVWGPGKYICEIFEEVAEHKLIQPTFITEYPWEVSPLARRNDENPFIT
DRFEFFVGGRELANGFSELNDAEDQAARFRKQVEEKDAGDDEAMHFDDDYIRALEFGMPP
TAGEGIGIDRLVMLFTDSPTIKDVILFPHMRPQAD
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcaagtaaaagcaccgcaagacgagaataaattgattgccgagcgtcgcggc
aagttagcgcaaattcgtgagaactgtccggccaacggccacccgaaccagtttgaacga
aaacactatgccaatgatttgcagtctgcccacggtgaaaaggataaggaaaccctggaa
gcagaaacagaggtttacagcattgccggtcgtgttatggcgaaacgcgggcctttctta
gtgcttcaggatatgacaggacgtatccaggcttatgccgacaaaaatgtgcaaaaagat
atcaaagcccgctggggcgtgctggatgtcggcgatattgtcggcgttagcggtaccctg
cacaaatccgggaaaggggatctttatgtcaatatggaccagtaccagttattgaccaag
tctttgcgtcctctgccggaaaaatatcacggtttatcggatcaggaaaccaagtaccgc
cagcgttatgtggacctgatgatcaatgaagagacccgcaatacctttaaggtgcgctct
aaagtggttgaggggatccgcaacttcctggcccagcgcgattatatggaagtggaaacc
cctatgctgcaggtgatcccgggaggggcaaccgccaagccgtttatgacttaccataac
tcgttggatatcgacatgtacctgcgtatagcgcctgagctttacctgaagcgcctggtg
gtgggcggttttgagcgggtgtttgagatcaaccgtaacttccgtaacgaaggtctgtcc
acccgccataaccctgaattcaccatgatagagttctatcaggcgtatgccgactatgaa
gacatgatgaacctgacggaagagatgctgcgcaccgtggcccaggatgtcttaggcacg
actatgatacgcaacaccgaaaaagatgaaaacggtgaagtgatcagcgaagttttttat
gatttcggccagccgtttgagcgtctgtctatggtggatgccatcttaaaacatgcgcct
gagctggatgaaagcattttgcgcaacccggaagaaaaccttgaagccttgaagttgatg
gcgcttaaggttggcgtaaaactatccgacgcttccctggtatggggaccgggtaaatat
atctgtgaaatctttgaagaagtggcggagcataagctgatccagccgacctttatcact
gagtacccgtgggaagtctcgccgctggcgcgccgtaatgacgaaaatccgtttattacc
gaccgctttgaattctttgtcggcggccgcgaactggccaacggtttctcggagttaaat
gacgccgaagaccaggcggcgcgtttccgcaagcaggtggaagagaaagatgccggtgac
gacgaagccatgcacttcgatgacgactatatccgtgcgctggaattcggtatgccgcct
acggcgggtgaaggcatagggattgaccgtctggtgatgctgtttaccgattcgccaacc
attaaagatgtgatcttattcccgcatatgcgtccgcaggcggattaa
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