KEGG   Thalassomonas viridans: SG34_005460
Entry
SG34_005460       CDS       T08831                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
tvd  Thalassomonas viridans
Pathway
tvd03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tvd00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SG34_005460 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvd03019]
    SG34_005460 (rnc)
   03009 Ribosome biogenesis [BR:tvd03009]
    SG34_005460 (rnc)
   03036 Chromosome and associated proteins [BR:tvd03036]
    SG34_005460 (rnc)
Enzymes [BR:tvd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     SG34_005460 (rnc)
Messenger RNA biogenesis [BR:tvd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SG34_005460 (rnc)
Ribosome biogenesis [BR:tvd03009]
 Eukaryotic type
  90S particles
   RNase
    SG34_005460 (rnc)
 Prokaryotic type
  rRNA processing factors
   SG34_005460 (rnc)
Chromosome and associated proteins [BR:tvd03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     SG34_005460 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: WDE08145
UniProt: A0AAF0CCU1
LinkDB
Position
1257928..1258614
AA seq 228 aa
MKNALALNRLMKRISYQFKQPELLTQALTHRSAKGAHNERLEFLGDSILGFVIAEALYEK
FPKNNEGDLTRMRSSLVKGVTLAEIAKDFHLGEHLILGPGELKSGGHRRESILEDAVEAI
IGAVYLDSNIETCRTLVLTWFAKRLAQIKPGHEQKDPKTRLQEFLQGRKIELPLYEVIHT
SGQSHNQEFTVRCTTSVLKNEVITKGTSRRKAEQAAAQQVLELLAHDK
NT seq 687 nt   +upstreamnt  +downstreamnt
atgaagaatgccctggcccttaaccggctgatgaaaaggatcagttatcaatttaagcaa
cctgagttgttgacccaggcgctgacgcaccgcagcgccaaaggggcccacaacgaacgg
ctggagtttctcggggactccattctcgggtttgtgatagccgaagccttgtatgagaaa
tttccgaaaaataacgaaggtgatctcacccggatgcgttccagcctggtaaagggggtg
acgctggcggaaatcgcaaaagattttcacttgggggaacacctgattttgggaccgggt
gaactgaaaagcggcggccaccgccgggaatccattcttgaagatgcggtggaagccatc
ataggcgctgtctatctggactcgaatatagaaacttgccgtaccctggtcctgacctgg
tttgccaaacgcctggcgcaaatcaaacccggacatgaacagaaagatccgaaaacccgt
ttacaggaatttttacagggacgaaaaattgaattgcctttgtatgaagtgatccatacc
agcggtcagtctcacaaccaggagtttaccgtgcgctgtaccaccagcgtgctgaaaaac
gaagtgataaccaaaggtaccagtcgccgcaaagcagaacaagcggcggcgcagcaagtg
ttggagttgctcgcacatgacaaataa

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