Thalassomonas viridans: SG34_005600
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Entry
SG34_005600 CDS
T08831
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvd03021
]
SG34_005600 (rpoS)
Transcription machinery [BR:
tvd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SG34_005600 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
DUF5812
Motif
Other DBs
NCBI-ProteinID:
WDE06397
UniProt:
A0AAE9Z502
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Position
1288947..1289873
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AA seq
308 aa
AA seq
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MGKQKELNEVVIDDKNCDQEVSLKAQDEVSANLDATQLYLSEIGFSPLLTAEEEVYFSRL
ALKGDEASRKRMIESNLRLVVKIARRYNNRGLPLLDLVEEGNLGLIRAVEKFDPERGFRF
STYATWWIRQTIERAIMNQTRTIRLPIHVVKELNIYLRAARELVQKLDHEPTAEEIAIAL
DKPVADVSKMLRLNERITSVDSPFSGDTEKALLDVIPDEKSGGPEGELQSEDMNNNIIHW
LNELNSKQREVLARRFGLMGYEAATLEDVGVEIGLTRERVRQIQVEALKRLRDILSQQNL
SIEAIFQN
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaacaaaaagaactaaatgaagttgttattgatgataagaactgcgaccaggag
gtctcattaaaggctcaggatgaggtttctgcgaacttggatgcaacccagttgtatttg
agtgaaattggtttttccccgttattaactgccgaagaagaggtctatttttcccggctg
gcgcttaaaggggatgaagcatcgcgcaaacgcatgatcgaaagcaatctgaggttagtg
gttaaaatagcccggcgctataataaccggggtttgcctctgttggatttagttgaagaa
ggaaatttaggactgatccgcgctgtagaaaaatttgatcccgaacggggtttccgcttt
tccacctacgccacctggtggatacgacaaacaattgaacgggcgatcatgaaccagacc
cgtaccatacgtttacctatccatgtcgttaaagaactcaatatctatttacgcgccgcc
agagagctggtgcaaaagctcgatcacgaacccacagccgaagaaatcgccatcgccctg
gataagccggtggcagatgtcagtaaaatgctcaggttgaacgaacgtatcacttcagtc
gactctccctttagcggcgataccgaaaaagccctgcttgatgtgatcccagatgaaaaa
agcggcggtccggaaggtgagctgcagtcggaagatatgaacaacaatatcatccactgg
cttaacgagcttaactccaagcagcgggaagtgctggcacggcgttttggcctgatgggc
tatgaagcagcgacgcttgaagatgttggtgtagaaatcgggcttacccgcgaacgggta
cggcaaattcaggtggaagcgctgaaacggttacgggatatcttaagccagcagaacctt
tctatagaagctattttccaaaactag
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