Thalassomonas viridans: SG34_008860
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Entry
SG34_008860 CDS
T08831
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvd03016
]
SG34_008860 (truB)
Enzymes [BR:
tvd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SG34_008860 (truB)
Transfer RNA biogenesis [BR:
tvd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SG34_008860 (truB)
Prokaryotic type
SG34_008860 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WDE06982
UniProt:
A0AAE9Z652
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All DBs
Position
1970092..1971045
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AA seq
317 aa
AA seq
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MAKRRKGRAINGILLLDKPYEMSSNHALQAAKRVYFAAKAGHTGALDPLATGMLPICFGE
ATKFSQFLLDTDKVYQVTAKLGIRTTTSDADGEIVAEKAVDVSADQLASALERFRGTSKQ
VPSMYSALKYQGQPLYKYAREGIEVPREARDITVFRLDLLRFEGDEVELEIHCSKGTYIR
TIVDDLGELLGCGAHVAELRRVAVGSYPADKMVTLEQIENLLAQAKEQDMSPSELLDPLL
LPMNTAVDGIPAVYIDEASASYLRHGNPVQVSGAPLDGLVQVHVGDEDQAEDSEFIGIGQ
INDDGLVAPKRIIVAQA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgtagaaaaggccgtgccatcaacggcattttgttgctggacaagccctat
gaaatgtcgtcaaaccatgccctgcaggcggcaaagcgggtttattttgccgctaaagcc
ggccataccggcgcgttagatccgctggcgaccggcatgctgccgatttgtttcggcgaa
gccaccaagttctcccagttcctgctggataccgacaaggtttaccaggtcacggccaag
ttagggatacgtaccaccaccagcgatgccgacggtgagattgttgctgaaaaagcggta
gatgtttccgctgaccagctggcttcggcgctggaacgtttccgcggcaccagcaagcaa
gtgccttccatgtactcggcgttaaaataccaggggcagccgttatataaatacgcgcgc
gaaggcatagaagtgccgcgtgaagcccgtgatattaccgtattccgtcttgatttgctg
cgctttgaaggtgatgaggttgaactggaaatccattgttcgaaaggcacctatatccgt
actatcgttgacgatttaggggagttgctgggctgcggcgcccatgtggccgagctgcgc
cgcgtggcggtgggcagttatccggcggataaaatggttaccctggagcagattgaaaac
ctgctggcacaggcgaaagagcaggatatgtcgccgtctgaattgctcgatcccttatta
ttgcccatgaataccgccgttgacggcataccggctgtttatatcgatgaggcctccgcc
agttatttaagacacggcaacccggtacaggtttccggtgcccctctcgatggcctggtg
caggtgcatgtcggcgatgaagatcaggccgaagacagtgagtttatcggtatcggccag
atcaatgatgacggtttagttgcccctaaacgtatcatagtggcgcaagcttaa
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