Thalassomonas viridans: SG34_012380
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Entry
SG34_012380 CDS
T08831
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvd02000
]
SG34_012380
Transporters [BR:
tvd02000
]
Other transporters
Pores ion channels [TC:
1
]
SG34_012380
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
OprF
OMP_b-brl
YfaZ
Motif
Other DBs
NCBI-ProteinID:
WDE07609
UniProt:
A0AAE9Z7U5
LinkDB
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Position
complement(2777199..2778434)
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AA seq
411 aa
AA seq
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MRNLTRKTCSYMLRSSLTVFGSLSLLLSAPSSLAETPDAKTLVGNAYFGVDTLYMSTDND
RKVNNPNNTSIDHGYGAGFNFGYRISPTFELRGYWNNLNLEVENNGKSPDGRMFGIDGLI
FPDAKNVYFITGINMMDLQARDVAVNVGAGYRHYFQDNFALQAETKAYYTPEEDHADYSL
GLGLVYFFDTNKPQISKPADSDRDGVPDSRDLCPATPAGTKVNSSGCPDSDNDGVSDNKD
LCPNSPAMAKVNSQGCGDNDGDGVANNLDNCPTTPRGEKVNSKGCPLYQDETVTIELLVQ
FDNNKSEVKSRYLSEIEKVARFMEQYPDTRVELAGHTSALGDEQYNQKLSEKRARAVASI
LTQKFSIDPKRVTAKGYGESRLKNPGNSRAAHAENRRMEAVISTQVKRQKK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatttaaccaggaaaacctgctcctatatgctgcgatcttcactcactgttttt
ggcagtttatctttactgctcagcgccccctccagcctggcggaaaccccggatgccaaa
acgctggtgggcaatgcctatttcggcgttgataccctttatatgagcacagataacgac
cgtaaggtgaacaaccccaacaataccagcatcgaccatggttacggcgccggattcaac
tttggctaccgtatcagcccgacctttgaactcaggggctattggaacaacctgaacctg
gaggtggaaaataacggtaaaagcccggacggccgcatgttcggcattgacggcctgatc
tttcccgatgctaaaaatgtctattttattaccggcatcaatatgatggacctgcaggcg
cgggatgttgccgtaaatgtcggcgccggttaccgccattattttcaggataattttgcc
ctgcaggctgaaaccaaggcttattataccccggaagaagatcatgccgactattccctg
ggtttaggcctggtatatttctttgataccaacaaaccacaaatcagtaaacccgccgac
agcgacagggacggcgtccccgacagccgggatctgtgtccggcaactcccgccgggacc
aaagtaaacagcagcggctgcccggacagcgataatgacggtgtcagcgacaataaagac
ctttgtcctaattctccggccatggccaaggtcaatagccagggctgcggcgacaatgac
ggcgacggcgttgccaataacctggataattgccccaccaccccaagaggagaaaaggtc
aacagcaaaggctgtcccctttatcaggatgaaaccgtcaccatagaattgctggtgcag
tttgacaacaacaaatccgaggtgaaaagccgttatctcagtgaaatagaaaaagttgcc
cgttttatggagcaatacccggatacccgggttgaactggccggccatacttccgccctg
ggagacgagcaatacaaccagaaactgtcggaaaaacgtgcccgggcggttgccagcatc
cttacccaaaaattcagcatagatccaaagcgggtcacggccaaaggttatggcgaaagc
cggctgaaaaaccccggcaacagccgggctgcccatgcagaaaaccgccgcatggaggct
gtgatcagcacccaggtgaagcgccagaaaaaatag
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