Thalassomonas viridans: SG34_013120
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Entry
SG34_013120 CDS
T08831
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SG34_013120 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvd03400
]
SG34_013120 (recC)
Enzymes [BR:
tvd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SG34_013120 (recC)
DNA repair and recombination proteins [BR:
tvd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SG34_013120 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WDE07750
UniProt:
A0AAE9Z6Q4
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All DBs
Position
2953782..2957213
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AA seq
1143 aa
AA seq
DB search
MIYLYPANKMENLLVLLDKIQQISPLAVFSQEIIVVQNAGMQHWLNLSLAKQRGISMNIR
YALPAQFLWKLMRSVASDEDVPDQSPYSREVLTWRLCALLASDAVVNNPEFAQPSRYWQQ
ETSAERAALKRYQLATQLADLYEQYLIFRPNWLDAWQRRESIFQDESGGTYACGLDEIEK
WQGLLWQLLIKELPYNPVSLMQDAIAGLSDNKARLPKRIVFFGINAMAPMWLDFINALSE
HIEIHFFHLNPCFSYWGDIVSEKQAMKAISSWVDGYDDIRSAVGNPLLASLGQQGREFMA
LLHNYSLVNIDVFEHAGSQSSGPGLQEPQTDPASLSVLAQLQNDILTLEDARQTPGKQRD
DSVVITSCHSALREVQGLHDWLLHQFNADSELTPKDILVMCPQIESYAPYVNAVFTRGWQ
DIDDKIPPLPCSIADRSSKDAEPLIAAFIDLLHLPDSRFQVSGLIALLRLPAMQQKFSLS
FEDIDKISLWIEQAAIHWGLDGQHKAGVLGLEQGNSSFTWQQGLSRLMTGFAYGDSEVIH
QEALLLPVVEGDDGALLGQLMLIIEQLQIFSRQLNTARSAGEWQIFLQQMLDELFVSTGD
HNFELIYHAIESLVEYCTHAVYHQHIALSVVRDFLNSHFSMPDPGRQFMVGQVTFCSMIP
MRSIPFKIIAVLGLNDGEFPRQRQPLGFDLLAMTPAKLGDRSRRGDDRYLFLEAIISARQ
ALYLSYQGRNIKTNAPREASLVLKELMEYLELGYGWQSSDIRQLPMQPFSPANYQGEFPG
FDEKWLALGTRAAFEEESDEHLLIPQESPAGGEQEPAEKPMQINAAELIAFFQHPVRQFA
RRQLNLYFELVSIELEDAEPFTADRLQSYQLREQLLDCYLAAGQAPGDTAEEETEQQLEH
VLATARLGGKFPDLPTTGELFDKWRDDSEQFSRVIIEQGGANPGLIYCQLTLPLASGSSI
SLSAQLPVQGQQLVFYRSSSAKAKDYFTLYLHQLMLQVWQRQVADGKILPADEEQQSLAH
VSHSSGFYFDTKSQKVSQYRLKEIPEPEKQLEQLLTAFISGQYQALLLNGELAEVYFKNT
ERGKAFGQQEFEKYWHDANAVRPLSADPYMYYFWPACPELNEHLPMIETIYRPLYQALEK
VKL
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
gtgatctacctttatccagccaacaagatggaaaatctgttggtgctgttagataaaatt
cagcagatatctcccctggcggtattcagccaggaaatcattgttgtgcaaaatgcggga
atgcagcattggcttaacctgtcgctggcaaaacagcggggcatcagcatgaatatccgc
tatgctttgccggcgcagtttttatggaagctaatgcgctctgtcgccagtgatgaagat
gtaccggaccagtccccttattcccgggaagtgctgacctggcgcctgtgtgccttgctg
gccagcgatgctgtggtcaataaccctgagtttgcccagcccagccgctattggcaacag
gaaacttccgcggaaagggcggccctgaagcgctaccagcttgccactcaactggccgat
ctatacgaacagtatcttatcttcaggccaaactggctcgatgcctggcagcgccgggaa
agcattttccaggatgaaagcgggggaacatatgcctgcggccttgatgaaatcgaaaag
tggcagggactcttgtggcagctattgattaaagaattgccctataacccggtaagcctg
atgcaggatgccattgccggtcttagcgataacaaggccaggttgcccaagcgtattgtg
tttttcggcatcaatgctatggcccccatgtggctggattttatcaatgccctgagcgaa
catatcgagatacacttctttcatttaaacccctgtttttcctattggggggatatagtt
tctgaaaagcaggcgatgaaggcgatcagcagctgggtggacggttacgacgatatccgc
tccgccgtcggcaatcctttgctggcaagccttggccagcagggacgggaatttatggcg
ctgttgcataattattccctggtgaatatcgatgtttttgaacatgccggttcgcaatcg
tcagggcctgggctgcaggagccccagacagatcccgcaagcctttctgtgctggcgcag
ctgcaaaatgatattttaaccctggaggatgcgcgccagacccccgggaaacagcgggac
gattccgtggtcatcaccagctgccatagcgccctcagggaagtgcagggcctgcacgac
tggttattgcatcaatttaatgccgacagcgagttaacgccgaaagatattttggtgatg
tgcccgcaaattgaaagttatgccccctatgtcaatgccgtttttacccggggctggcag
gatattgatgataaaatcccgcctttgccttgctccatcgccgacaggagcagtaaagat
gccgagccgctgatcgccgcttttattgacctgcttcatttacccgacagccgcttccaa
gtgtccggtttgatcgccctgttaaggttacctgcgatgcagcagaagttttccctgagc
tttgaagacatagataaaattagcctctggattgaacaggcggctattcactgggggctg
gacggacagcataaagccggcgttttagggcttgaacagggcaacagcagttttacctgg
cagcagggactcagccggttgatgacggggtttgcctacggcgacagcgaagtgatccat
caggaggcgttattattgcctgtggtggaaggggacgacggcgctttattaggccagctg
atgttgattatcgaacagctgcaaattttttcccgccagttgaacacggcaagaagcgcc
ggtgagtggcagatttttttacagcaaatgctcgatgagcttttcgtgagtacgggcgac
cacaactttgagctgatttatcatgccattgaatccctggtggaatattgcacccatgcc
gtttatcaccagcatattgccttaagcgtggtgcgggattttcttaacagccatttcagc
atgccggaccccggccgtcagtttatggtgggccaggtaacgttttgctctatgatcccc
atgcgcagcattccgtttaaaatcattgccgtgttagggcttaacgacggggagtttccc
cgccagcgccagccgttgggatttgacttgctggcgatgacgccggcaaaactcggcgac
agatcgcgccgcggcgatgacagatatttattccttgaagccattatttctgcgcgccag
gccctttacctgagttaccagggacgcaacattaaaaccaatgcccccagggaggcctcc
ctggtgttaaaagagctgatggaatatctggagctgggttacggctggcaaagcagcgat
atccggcaattgccgatgcagccctttagtccggccaattatcagggggagtttcccggg
tttgacgaaaaatggctggccttgggcacacgcgccgcttttgaagaagagagcgatgaa
catttgcttattccgcaagaaagcccagcaggcggtgagcaggagccggcagaaaagccg
atgcaaataaatgctgccgagttgattgcttttttccagcatccagtaaggcaattcgcc
cggcgccagctgaacctttattttgagctggtgagcatagagcttgaagatgccgaacct
tttacagccgatcggctgcaaagctatcagctcagggagcagttgcttgactgttacctg
gcggccgggcaagcacccggtgatacggcagaagaggagacagagcagcagcttgagcat
gtgctggcaactgcgcgcctgggaggcaagtttcccgatttgcccaccacaggggagctg
tttgataaatggcgggacgacagcgagcaattttcccgggtgatcattgagcaggggggg
gccaaccccgggctgatctattgccagctgacattgcctctggcaagcggcagcagcata
agtttaagcgcccaattgccggtgcaggggcaacaactggtattttaccgaagcagcagt
gccaaggccaaggactattttaccttatacctgcaccaactaatgctgcaggtatggcag
cggcaagtggctgacgggaaaatactgccggcagacgaggagcagcaaagcttagcacat
gtcagccacagcagtggtttttattttgataccaaaagccagaaagtcagccaataccgg
cttaaggaaattcccgagccggaaaaacagcttgagcagctgctaacggcatttatctca
ggccaataccaggccctgctgcttaacggcgagttggcggaggtttattttaaaaacaca
gaaaggggcaaggccttcggccagcaggaatttgaaaaatactggcatgacgccaatgcc
gtacgccccttgtcggcggatccctatatgtattatttctggccggcatgtcctgagtta
aacgagcatctgcctatgatagaaaccatttaccggcccttgtaccaggcgcttgaaaag
gtgaaattatga
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