Thalassomonas viridans: SG34_013960
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Entry
SG34_013960 CDS
T08831
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvd03400
]
SG34_013960 (radA)
DNA repair and recombination proteins [BR:
tvd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SG34_013960 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DUF7125
DnaB_C
GvpD_P-loop
AAA_22
AAA_14
ABC_tran
AAA_16
AAA_33
AAA_29
Zeta_toxin
AAA
Rad51
NB-ARC
SLFN-g3_helicase
AAA_19
RsgA_GTPase
nSTAND3
NPHP3_N
AAA_24
NTPase_1
cobW
Viral_helicase1
TsaE
AAA_7
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
WDE07887
UniProt:
A0AAF0C9U3
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All DBs
Position
3117358..3118743
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AA seq
461 aa
AA seq
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MAKAKNKISYVCSECGTDYPRWQGNCGACKAWNTIVEFKEAKVPTQRTAQTSAGYSVQDA
EIEKLSEVSDQQLHRYKTGSSEFDRVLGQGIVHGSVVLLSGSPGAGKSTLLIDVLSQLSQ
IAPALYVSGEESKNQIKDRGDRLKLDLSKIDIMTTGDIERICQVALDRGHKFLVIDSIQT
MFLTGIDSSPGNVTQVKESAAYLNRASKEHGITTIIIVHETKDGSISGPQTLSHIGDATL
RIARESDSKYRTIRADKNRFGSAEEIGTLAMMPDGLKDVTNPSAIFLEHGSVEASGNIAY
ASAEGRRTLLVNLQSLVDVSNGEIPQRGVVGVDYKRLSMLLAVMRKRMSVSIGDNDIYIN
VVGGLKLNETGTDVPMLLAMLSSFRDKILSSKTLAFGEVGLSGEVRPVPMGQERIKEAIR
NGFEIVIVPKKNYHKSLETPGVKLIAISQVSELENVFDLAT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcaaaaaacaaaatcagttatgtgtgctcggagtgcggtacagattatccg
cgctggcagggcaattgcggcgcctgtaaagcatggaataccatagttgaatttaaagaa
gctaaggtgcctacccaaagaaccgcacaaacctcggcggggtattcggtacaggatgct
gagattgaaaagctcagtgaagtttccgatcagcagctgcaccgctataaaaccggcagc
agcgaatttgaccgggtgctgggacaaggcatagtgcacggctctgtggtgctgctttcc
ggttcgccgggggcgggtaagtcgaccctgctgattgatgtcttgtcccagttgagtcag
atcgccccggcgctttatgtcagcggcgaggaaagcaaaaaccagatcaaagacagggga
gatcgcctgaagctggatctgagtaagattgacatcatgaccacgggggatatcgagcgt
atctgccaggtggcactggacaggggccataagtttttggtgatcgactctatccagacc
atgtttttaaccggtatagattcctctccgggcaatgtcacccaggtgaaagagtcggcg
gcttatttaaaccgggcatcgaaagagcatggtatcaccaccattattattgttcatgaa
acaaaggacggcagcatcagcgggccgcaaaccttgagccatatcggcgatgccacttta
cgtatcgcccgtgaatcggattcgaaataccgtactatacgcgccgataaaaaccgtttt
ggcagtgccgaagaaatcggtaccctggcgatgatgcctgacggccttaaagatgtgacc
aatccctcggcgatctttttagagcacggcagtgtcgaggcttccggcaatattgcctat
gcctcggcggaagggcgcagaactttgttggtgaacctgcaatccctggtggatgttagt
aacggtgagatcccgcagcggggcgtggtcggggttgattataaacgtttgtctatgctg
ttggcggtgatgcgcaaacgtatgtctgtatccataggggataacgacatttatatcaat
gtcgtcggcggcctgaagcttaacgaaaccggtaccgacgtacctatgctgctggcgatg
ctgtcatcgtttcgcgataagatcctttccagcaaaaccctggcctttggtgaagtcggc
ctttccggggaagtacgtcccgtgcctatgggacaggagcgtatcaaggaagcgatccgt
aacggttttgaaatcgtgatcgtgcccaagaaaaattaccataaaagcctggaaaccccg
ggagtgaagcttattgccatcagccaggtgtctgagctggaaaatgtcttcgacctggcg
acttga
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