Thalassomonas viridans: SG34_016375
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Entry
SG34_016375 CDS
T08831
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
SG34_016375 (lapB)
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
Rubredoxin_2
TPR_16
TPR_14
TPR_12
TPR_8
TPR_11
TPR_20
TPR_7
ANAPC3
TPR_17
HrpB1_HrpK
Alkyl_sulf_dimr
TOM20_plant
Motif
Other DBs
NCBI-ProteinID:
WDE03011
LinkDB
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Position
complement(3702621..3703790)
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AA seq
389 aa
AA seq
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MLELLFLLLPIAMGYGWFMGRNSIKQKDQSAKQDLSIKYSTGLNYLLSNQQDKAIDYLLE
ALRVEDDTVEAHFAMANLFRRRGELDRALKVHEYLVRQSHLPTQDKQQAVFELGKDFLSA
GLYDRAEKMFTKVLKSKTYGLKALTYLLQIYQSTKDWQQGIALKKVIVKTKDKRLLHTLA
NFYCELATTALEKDEFIEVLELLENALSYDPNSCRANWLMAQIYENHQQYREASQCYRDI
YQQDKDFFPEVIEPMHACYMHQDIEEEFFTFIRKVYEETGSSSALLKYLTHLEARYGINK
AKEFLLSALKRRPTIRGFKHFVKMQMTDSQDSHQSEGLDVIKELISAYLNMRPRYTCHTC
GFNSSTHYWSCPSCHGWEQLKPVRGLEGE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgctagagctgttatttctgttgttgcctatcgccatgggttatggctggtttatggga
cgcaacagcatcaagcaaaaagatcaaagtgccaagcaggacttgtcgatcaaatactcc
acagggttaaactacttactctccaaccagcaggataaagcaatagactacctgcttgaa
gccttaagggtggaagacgataccgttgaagctcattttgccatggccaacttattccgt
cgccgcggcgagctggaccgggcattaaaggtgcacgaatacctggtcaggcaaagccat
ttgcctactcaggacaaacagcaggcggtgtttgaactgggtaaggattttttaagtgcc
ggcttgtatgaccgcgctgaaaaaatgtttacgaaagttttaaaatcgaaaacttatggc
ttgaaggccctgacctatctgctgcagatctatcagtccactaaggactggcaacagggc
attgctttgaaaaaagtgatagtgaaaaccaaagacaaacgtctgttgcacacactggca
aatttttactgtgagctggccacgacagctctggagaaagacgagtttatcgaagtcctg
gaacttctggaaaatgccttaagttacgatcccaactcttgccgtgccaactggctgatg
gcgcagatttacgagaaccatcagcaataccgggaagcgagtcagtgttaccgggatatt
tatcagcaggataaagacttttttcctgaggttatagagcctatgcatgcctgttatatg
caccaggacatcgaagaagagttttttactttcatccgtaaagtgtatgaagaaaccggc
agctcaagcgccttgctcaagtacctgacacatctggaggccaggtacggtatcaataaa
gcgaaagagtttttattatcggccctaaaaaggcggccgacgatacgcggctttaagcat
tttgtaaaaatgcagatgacagattcgcaagacagccatcaaagtgaaggcctggatgtg
atcaaagagctgatctcggcttatttaaatatgagaccccgttatacttgccatacctgt
ggttttaacagcagtacccattattggtcatgcccgtcctgtcatggctgggagcagctg
aagccggtacgcgggttagaaggcgagtag
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