Thalassomonas viridans: SG34_017940
Help
Entry
SG34_017940 CDS
T08831
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvd03009
]
SG34_017940 (rimO)
Enzymes [BR:
tvd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SG34_017940 (rimO)
Ribosome biogenesis [BR:
tvd03009
]
Prokaryotic type
ribosomal protein modification factors
SG34_017940 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WDE03274
UniProt:
A0AAE9YZJ2
LinkDB
All DBs
Position
complement(4042340..4043761)
Genome browser
AA seq
473 aa
AA seq
DB search
MTVEQFDPKQTTTLDIPSKTIEANQAELAPRGGEAKRSRIGFISLGCPKNLVDSERILTQ
LRTEGYDVVNSYDDAELVIVNTCGFIDSAVKESLDTIGEALTENGKVLVTGCLGAKEDEI
TEIHPNVLGVTGPHAYEEVLNQVHEHVTKPEHDPFISLVPDHGVKLTPKHFAYLKISEGC
DHRCTFCIIPSMRGDLDSRPVGDVLGEAKRLVNAGVKELLVISQDTSAYGADVKNKTDFW
DGMPVKTHMQALCEQLSKMGVWVRLHYVYPYPHVDNIIPLMAEGKILPYLDIPFQHANKR
ILKLMKRPGSPERTLERIKKWREICPELVIRSTFIVGFPGETEEEFEELLAFLQEAQLDR
VGCFKYSPVEGAKANDLPDQIDEAVKEERLQRFMAVQAQISADKLQQRIGQEYLVLIDEV
NSEGAVGRSYMDAPEVDGKVYLTDEFDVQPGDQVWVQIIHADEHDVWGVRVED
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgaacaatttgatcccaagcaaaccacgactttagatattccttcgaaaacg
attgaagcgaatcaggctgaacttgcaccccggggaggagaagcaaagcgttcacgcata
ggttttatttcacttggctgtccgaaaaatttggtggactccgaacgtatcctgacccag
ctgagaaccgaagggtatgatgtggttaacagctatgacgatgccgagctggtgatcgtc
aatacctgtggttttattgactcggccgtaaaagagtccctggatactatcggcgaagca
ttgacggaaaatggcaaggtactggtgaccggctgtttaggcgccaaagaagatgaaatt
accgaaattcatcccaacgtgcttggcgtgaccgggccgcatgcctatgaggaagtgctt
aatcaggtgcatgagcatgtgactaagcctgaacacgatccttttatctccctggtgccg
gatcacggcgttaagctgaccccgaaacattttgcctacctgaaaatatcggaaggttgt
gatcaccgctgcactttctgcattatcccgtcgatgcgcggcgatttggattctcgcccg
gtaggggacgtgctgggggaagccaaacgcctggtaaatgccggggtcaaagagttgctg
gtgatttcccaggatacctcggcatacggcgccgatgttaaaaataaaaccgacttctgg
gacggcatgccggtgaaaacccatatgcaggccctgtgtgagcaattatcgaaaatgggc
gtttgggtaaggctgcattacgtgtatccctatcctcatgtcgataatattattccgctg
atggcggaaggtaagattctgccttacctggatattccgttccagcatgccaataaacgt
atcttaaaactgatgaagcgccccggcagtccggagcgtaccttagagcgcattaaaaag
tggcgggagatttgtcccgagctggtgatccgttccacctttatcgtcggtttcccgggg
gaaacggaagaagaatttgaagagttgctggcgtttctgcaggaagcccagcttgaccgg
gtcggctgcttcaaatattcaccggtagaaggggccaaggccaatgacttgccggatcaa
attgacgaagccgttaaagaggagcgtttacagcgttttatggcggtgcaggcgcagatc
agtgccgataaactgcaacagcgtatcggccaggaatacctggtgttaatcgatgaagtg
aacagtgaaggcgcggttggccgcagctatatggatgcgcccgaggttgacggtaaggtt
tatctgaccgatgagtttgatgttcagcccggcgatcaggtgtgggtgcagattatccat
gccgacgagcatgatgtctggggcgtgcgggtagaagattaa
DBGET
integrated database retrieval system
