KEGG   Thalassomonas viridans: SG34_018040
Entry
SG34_018040       CDS       T08831                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
tvd  Thalassomonas viridans
Pathway
tvd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tvd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SG34_018040 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tvd02044]
    SG34_018040 (tssM)
Secretion system [BR:tvd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SG34_018040 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical Hydro_N_hd AAA_33
Other DBs
NCBI-ProteinID: WDE03293
UniProt: A0AAE9Z157
LinkDB
Position
complement(4064823..4068362)
AA seq 1179 aa
MSFKETSKKYLSKLKPKVLITALGLICLALLIWFGGPLIAIAGYEPLLSPSTRIIVLLLI
VIIWGLFNLTFKAQDKKNNEQMVDKLINGEETDKGSAEDRAKAEIDLLHKKMAQAIDILK
NTRFEKNKGIYELPWYIMIGPPGSGKTTAIQNSGLEYPLKEKMGIDMIQGVGGTRHCDWW
FTNKAVLIDTAGRYTTQDSHARQDARAWQGFLGLLKKFRPLRPINGVIISMGMAELLNQT
KTERNLHARAIKQRLQELQNQLGMTFPVYVLLSKSDLVAGFNEFFDDFAKEDCEQIWGVT
FALNAQDEQGSIVSGFNKEFHGLLKNLNARINSRLKVERDLDRRAIIYEFPKQLRLLQSA
ADDFLKEIFSPNAYEEVPMLRGVYLTSATQEGTPIDHLSAHLSTGVRNQLKSQPAKQVRG
YFIKGLLEEVIFPEKNLATTNRQRDKQNSLLRRGVIAAASLLTLGLSYAWWSSYDWNSAL
VDQTHQALVQYREVSDGGLNKDTEIITLTKGLTGLRALPVGYDGEPLAGARTMGLYQGDK
LKQPAVAAYERALQGYLMPYLIKVLSQEMSNNSLHLNYLYETLKTYLMLYHPRYYVEEDI
KIWFSAYFDRYIPGEINAGIRTELNQHLATALELGMRGEDFSEAVVARARESLTQLPLVE
RAYQRLKSDFIQSSIPDFKLVDILSPDSLEGFTFQSGRSFNQGIPGLFTYSGFHGIFSIE
KKRVIKRLIEDSWVYGDDLNTLDEATKIKIAEQLEQKYIRDYIFYWEDFLSDLTLKSYAN
SRDGEKITHALSSPDAPVKSIIAAVKKNVQLTKIPLSGNEKAAAGVAKNAADLAFQSKKS
RLSRLLPDKGLKLELPGKEVEQAFSELLAVDMSQLDKVQGILRSINRNLDRVAQTSSQSS
SYMNQKLESNFEQLGNELSEHIVDMPYPLANWLDTIATQTKGLARANQNERLNGIWRSQV
LSEFRRGISGRYPFNRKSSQDVRLRDFSRFFGYEGTLDKFWNRYLKAYVDTSRQPWHFTK
DIGISQEILIMYQDTKKIREAFFEAGMKSPRVNFSLQPQALDRNVSLFMLEIDGQQLNYR
HGPPRKEQFIWPGPSANSETRIAFTPPNGGRSINAKYSGEWSLFRFLDKLNRERPKTKSD
GLLEIKLSGYNARLKFMPNSVNNPFWMLNLEGFSCPTTL
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgtcgtttaaagaaacaagtaaaaagtacctgtcaaagcttaaacctaaagtgctgatc
acagctttggggttgatctgcctggccctgctgatttggttcggcggtcccctgattgcc
attgccggctatgagcctttgctgagcccctcaacccgtattattgttttgctcctgata
gtgatcatttggggtctgttcaacctgacttttaaagcccaggataaaaaaaataatgag
caaatggtcgacaagctgatcaatggtgaggagaccgacaagggctcggcggaggacagg
gcgaaagcggaaattgaccttttgcacaaaaaaatggcccaggccatagatatcctgaaa
aataccagattcgagaaaaataagggcatatatgaactgccctggtacatcatgataggg
ccgccgggctcaggcaaaaccacggcgatacaaaactccggactggaatacccgttaaag
gaaaaaatgggcatagacatgatccagggggtgggcggcacccgccactgcgactggtgg
tttaccaataaagcggtactgatagatactgccgggcgttataccacacaagacagccat
gccagacaggacgcccgcgcctggcaggggtttttggggctgttaaaaaaattccggccg
ctgcgtcccattaacggggtgatcatttccatgggcatggcggagctgcttaaccagacc
aaaaccgagcggaatctccatgccagggcgatcaagcagcgtttgcaggagttgcagaac
cagctgggcatgacttttcccgtttatgtgttgctgtcaaaatcggatctggtggcggga
tttaatgagttttttgatgattttgccaaagaagattgcgaacagatctggggggtgact
tttgccctcaatgcacaggacgaacagggcagtattgtcagcggctttaataaagagttt
catggcctgctgaaaaacctgaatgcccgtatcaatagccggttaaaagtcgaaagggat
ctggatcgccgcgccatcatttatgaatttcccaagcagctcaggttgctgcaaagcgct
gccgacgattttttaaaagaaattttctctcccaatgcctatgaagaagtgccaatgctg
cgcggggtgtatcttaccagcgccacccaggaaggcacgccgatagaccacctcagcgcc
catttatccaccggggtccggaaccagctcaagtcacaacccgccaaacaggtccggggt
tattttatcaaaggtttgcttgaagaagtcattttccccgaaaagaatctcgccaccacc
aaccgccagcgcgacaagcaaaacagcttgttaaggcgcggcgttatcgccgcggcctca
ctgctaactttagggctgagttatgcctggtggagcagttacgactggaacagtgccctg
gtggaccaaacccatcaggccctggtgcaataccgggaggtcagcgatggcggtttaaac
aaggatactgagattatcaccttaaccaaaggtttaaccggcttaagggccttgcctgtg
ggttatgacggcgagccgttagccggtgccagaaccatggggttatatcagggggacaag
ttaaaacagcccgcggttgccgcctatgaacgggcgttgcagggataccttatgccttac
ctgataaaagtgctgagtcaggagatgtcgaataactccctgcatcttaactacctgtat
gaaaccttaaaaacctatcttatgctttaccaccccaggtattatgtcgaagaagatatc
aagatctggttttccgcttattttgatcgttacattcccggcgagatcaatgccggtatt
cgtaccgagctgaatcagcatctggccacggcgcttgagctgggcatgaggggagaggat
ttttccgaggcggttgttgcccgggcccgtgagagtttgactcaactgcctttagtggag
cgggcctatcaaaggctaaaaagcgattttatccagagcagtatcccggattttaaactg
gtggatatcttaagcccggacagcctggagggcttcacctttcaaagcgggcgcagcttt
aatcaggggattccggggctgtttacctatagcggcttccacggtattttcagcatagaa
aaaaaacgcgtgatcaaaaggttaatcgaagacagctgggtttatggtgacgatctcaat
accctggatgaagccacgaaaatcaagattgccgagcagctggagcagaaatatatccgg
gattatatcttttactgggaagacttcttaagcgatctgaccctgaaatcttatgccaat
tcccgggacggggagaaaattacccatgccttatccagcccagatgccccggtaaaaagt
attattgccgcggtgaagaaaaatgttcagctgaccaagattccactttcgggtaatgaa
aaagcggcggcgggagtggcaaaaaatgcggcggaccttgcctttcaatcgaaaaaatcc
cgtctgagccggttattgccggataaagggctcaagctcgaattaccgggcaaagaagtg
gaacaggcctttagcgagctgttggcggtagatatgagccagttggataaggttcagggc
attttacgttcgataaaccgtaatctcgatagggtggcccagaccagcagccagtccagc
tcttatatgaatcagaagctggaaagtaattttgaacagctgggcaatgagctttccgag
catatcgtcgatatgccttaccccctggccaactggctcgacactatagccacccagacc
aaaggactggcgcgggccaaccagaatgaaaggttaaacgggatctggagatcccaggtg
ctgtcggagtttcgccgcggcatcagtggccgttatccctttaaccgcaaatccagccag
gatgtgcgtctgagagacttcagccgctttttcggttatgaaggcactctggataagttc
tggaacaggtaccttaaggcctatgtcgataccagccggcagccctggcatttcaccaaa
gatataggtatcagtcaggaaatcttaatcatgtaccaggataccaagaaaatccgtgag
gctttttttgaagccggaatgaagtcgcccagggttaatttcagtctgcagccccaggcc
ttagaccgcaatgtcagtctctttatgctagaaattgacggccagcagttaaactaccgc
cacgggccgccaagaaaagagcagtttatctggccgggacccagcgccaacagcgaaaca
cgcattgcctttacgcctcccaatggcggccgctccatcaatgccaaatattccggcgag
tggtcattatttcgctttttggacaagttaaaccgggaaaggccgaagactaagtcggac
ggtttgttggaaatcaagttaagtggttataatgccaggcttaagtttatgcccaacagt
gttaacaacccgttttggatgttgaatctggagggcttttcatgtccgaccaccttataa

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