Thalassomonas viridans: SG34_019300
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Entry
SG34_019300 CDS
T08831
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd00061
Fatty acid biosynthesis
tvd00071
Fatty acid degradation
tvd01100
Metabolic pathways
tvd01212
Fatty acid metabolism
tvd02024
Quorum sensing
tvd04146
Peroxisome
Module
tvd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SG34_019300 (fadD)
00071 Fatty acid degradation
SG34_019300 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SG34_019300 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SG34_019300 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tvd01004
]
SG34_019300 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvd04147
]
SG34_019300 (fadD)
Enzymes [BR:
tvd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SG34_019300 (fadD)
Lipid biosynthesis proteins [BR:
tvd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SG34_019300 (fadD)
Exosome [BR:
tvd04147
]
Exosomal proteins
Exosomal proteins of breast milk
SG34_019300 (fadD)
Exosomal proteins of breast cancer cells
SG34_019300 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WDE03524
UniProt:
A0AAF0C856
LinkDB
All DBs
Position
complement(4358650..4360305)
Genome browser
AA seq
551 aa
AA seq
DB search
MGKIWLEKSYPPGVPFEINPDKYASLVEMFNKYVKQYAQRTAFINMGAEITYSELESQVK
AFAAYLQQDLGLKKGDKFAIMVPNSLQYPIALFGALLAGLTVVNVNPLYTARELEHQLKD
SGTKAMLIIENFAHTLEQVIDNTPVEHVILTSLGDRLGKVKGGVVNFVVKYIKKMVPAFN
LPNALSFNKALIKGASMTFSPVELKGEDLAFLQYTGGTTGVSKGAMLTHRNMVANLEQAK
AALSPLLDEGQELIVTALPLYHIFALTANCLMFLTIGGTNLLITNPRDMPNFVKELGKYK
FTALTGVNTLFNGLLNTPGFSNLDFSKLKLSLGGGMAVQRPVAERWQQVTKSRLLEGYGL
TECAPMVSLSPYNQEAYDGTIGVPAASTDVKIMLEDGTEAPVGEPGEMWVKGPQVMKGYY
NRPEASAEILKDGWLATGDVASMDESGHFTIVDRKKDMIIVSGFNVFPNEVEEVVMEHEG
IVEAAAVGVPHEVNGEIVKIFVVRKNGALEEAEIISHCRERLTNYKVPKLVEFRDELPKT
NVGKILRRELR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatatggcttgagaaaagttatcccccaggagttccgtttgaaataaacccc
gacaagtatgcatcacttgttgagatgtttaataaatacgtcaagcaatacgcgcagcgc
acggcgtttattaacatgggtgctgaaatcacgtacagtgaattagaaagtcaggtgaaa
gcttttgccgcatatttgcagcaagatttaggcttaaagaaaggcgacaagttcgccatc
atggttcccaacagtttacagtatccgattgccttatttggcgccttgctggctggttta
actgtggtcaatgttaaccccctgtataccgcgcgtgagctggagcaccagttaaaagat
tccggcactaaggccatgttgatcatcgaaaactttgcccataccctggagcaggtgatc
gacaataccccggtagaacatgttattttaacttccctgggtgatcgcctgggtaaagtg
aaaggcggcgtggttaactttgttgttaaatacatcaaaaagatggtaccggcgtttaat
ctgccaaatgcccttagtttcaataaggccctgatcaaaggcgctagtatgactttcagc
ccggttgaacttaagggtgaagatctggcgtttttacaatataccggtggtactacagga
gtttccaaaggcgccatgctcacccaccgcaatatggtggcgaacctggagcaggcgaaa
gcggcgttaagcccgctactggacgaagggcaggagctgatcgtaacggccttgcctttg
taccacatctttgcgctgaccgcgaactgcctgatgttcctgaccataggcggcaccaac
ttgctgatcaccaaccccagggacatgcctaactttgttaaagaactgggcaaatacaag
tttaccgctttgaccggggtgaataccctgtttaacggtttgctcaacactccgggcttc
agcaatctggatttcagcaaattaaagctgtctttaggtggcggtatggcggtgcaaaga
ccggtggccgaacgctggcagcaggtaaccaagtcccgtctgttggaaggttacggcctg
acggaatgtgcgcctatggtgagtctgagcccgtataaccaggaagcgtatgacggcact
atcggcgtaccagcggcctctaccgatgtgaaaatcatgctggaagacggcaccgaagca
cctgtgggtgaacccggtgaaatgtgggtaaaaggcccgcaggtgatgaaaggttactac
aaccggccggaagcttccgccgagattttaaaagacggctggctggcgaccggggatgtg
gcttctatggatgaaagcggccatttcactattgttgaccgcaaaaaagacatgattatc
gtttccggctttaacgtcttccctaatgaagttgaagaagtggtgatggagcatgaaggt
attgtcgaagccgctgctgttggcgtgcctcatgaagtgaatggtgaaatcgtcaaaatt
ttcgtggtgcgtaaaaacggcgccctggaagaagcggaaatcatcagccattgccgcgag
cgcctgaccaactataaggtgcctaagctggtagagtttagggatgaattgccgaaaacc
aatgtaggtaagattttaagaagagaactgcgttaa
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