Thalassomonas viridans: SG34_019605
Help
Entry
SG34_019605 CDS
T08831
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvd03016
]
SG34_019605 (truA)
Enzymes [BR:
tvd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SG34_019605 (truA)
Transfer RNA biogenesis [BR:
tvd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SG34_019605 (truA)
Prokaryotic type
SG34_019605 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
WDE03575
UniProt:
A0AAE9Z005
LinkDB
All DBs
Position
complement(4417664..4418446)
Genome browser
AA seq
260 aa
AA seq
DB search
MRYALGVEYDGKNYYGWQRQNDFISVQESLETALSKIADEPIEVVCAGRTDTGVNATNQV
VHFDTHKVRKDVAWTLGVNTKLPKDIAVKWVRAVSDEFHARFSATARRYRYIIDNGEFRP
AIMSKGLSFCHHPLDEGLMHQAAQYLIGRHDFTSFRTVHCQSHSPNRTLHHCNVSRHGQY
IVIDIKGNAFLHHMVRNIAGSLMRVGQGLEPVSWIKEVLEAKNRCVAGITAPSGGLYFVE
VDYPEDFELPKTSPGPLFFI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcgatatgctttaggggttgaatacgatggtaaaaattattacggctggcagcgccag
aacgattttatcagtgttcaggagtcattagaaaccgcattatcaaaaatcgcggatgag
cctatagaagtggtttgtgccgggcgcaccgataccggggtaaatgccactaaccaggtg
gtgcattttgacacccataaagtccgtaaggatgttgcctggacattaggtgtgaatacc
aagctaccgaaagatattgccgttaaatgggtacgggccgtcagcgatgagttccatgcg
cgctttagcgccactgccaggcgctaccgttatatcatagataacggcgagtttcgtccg
gcgattatgagtaagggcctgagtttttgccaccacccgctggatgaaggcctgatgcac
caggctgcccagtaccttatcggccgtcacgactttacctcgtttcgcaccgtgcattgc
cagtcccattcacccaacagaaccctgcatcactgtaatgtctctcggcatgggcaatat
atagtgatcgatattaagggcaatgctttcttgcatcatatggtgagaaatattgccggc
agcctgatgcgggtaggccagggattagagccggtgagctggataaaagaggtgcttgaa
gcgaaaaaccgctgtgtcgccgggattacggcaccatccggtggcctgtattttgttgag
gtagattatccggaagatttcgagttgccgaaaaccagtcccgggccgctgtttttcata
tga
DBGET
integrated database retrieval system
