Thalassomonas viridans: SG34_020300
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Entry
SG34_020300 CDS
T08831
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvd03400
]
SG34_020300 (vsr)
DNA repair and recombination proteins [BR:
tvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SG34_020300 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
WDE03705
UniProt:
A0AAF0C805
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All DBs
Position
complement(4584839..4585339)
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AA seq
166 aa
AA seq
DB search
MIDVHSKKIRSKNMAAIRNKNTKPELLIRRLLHSLGLRFRLYNKSLPGTPDITLAKYKAV
IFVNGCFWHGHEMNGVNCHFFTTPKTRTEFWLDKINGNKKRDQQVFSELSKDGWKVLYIW
ECALKGKRKLEEGRLIDTIEEWLLAHDTSAEIDCRGIKKKAIINFL
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
ttgatagacgtacattcaaagaaaatacgcagcaaaaatatggctgcgattaggaataaa
aatactaagccggaattattaatacgccggcttttgcattctcttggtctccgctttcgt
ctgtataataaaagccttcccggaacacctgatatcactttagcaaaatataaagcagtc
atttttgtaaatggttgcttctggcatgggcatgaaatgaatggtgtaaattgccatttt
tttacaactcctaaaaccagaactgaattttggttggataaaattaatggcaataaaaag
cgggatcagcaggtgttttctgagctcagtaaagatggctggaaagtgttatatatatgg
gaatgtgcgcttaaaggcaaacgcaagctagaggaaggcaggctaattgatactattgag
gaatggctacttgcccatgataccagtgctgaaattgattgtagagggattaaaaagaag
gctatcataaattttttgtga
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