Thalassomonas viridans: SG34_021850
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Entry
SG34_021850 CDS
T08831
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
tvd
Thalassomonas viridans
Pathway
tvd02020
Two-component system
tvd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SG34_021850
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SG34_021850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvd03000
]
SG34_021850
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tvd02035
]
SG34_021850
Transcription factors [BR:
tvd03000
]
Prokaryotic type
Helix-turn-helix
Other families
SG34_021850
Bacterial motility proteins [BR:
tvd02035
]
Flagellar system
Flagellar assembly proteins
Others
SG34_021850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
Mg_chelatase
AAA
bpMoxR
AAA_7
AAA_2
Pre_tape_measure
AAA_3
Motif
Other DBs
NCBI-ProteinID:
WDE03986
UniProt:
A0AAE9YZD5
LinkDB
All DBs
Position
complement(4968958..4970490)
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AA seq
510 aa
AA seq
DB search
MQEQKHIIVVDSDDARRQHVETVLSFVGEQYHALDETRLAAYLLDKVTTGAAAKAKDNHP
VLTVILCGRLSPALVETVQQYPAIPFVIHDVLDQQPLSACVNIIGELKKPLNYAQLTELI
HHCHQYHNKLPSRQGKNKSANALFRSLVGVSEAMNQVRFLIEQVADTNATVLVLGESGTG
KEVVARNIHDLSERSGAPFVPVNCGAIPGDLLESELFGHEKGAFTGAISARKGRFELAEG
GTLFLDEIGDMPQPMQVKLLRVLQERTFERVGGTKSIKADVRIIAATHQQLEGMIKTGDF
REDLFYRLNVFPIETPALRERQEDVPLLLQELVKRFEQEQGHSVRFTDQAIESLQQHPWS
GNVRELSNLIERMIIMYGDQVVNVSELPAKYRHIEVEEYQPEYPEELQEREAINELFSGF
DDEEEDETATPGTGPFDSFDTFPQEASTDGLLPAEGLNLKEHLAELEVSLVTQALERHDW
VVARAAELLGMRRTTLVEKMRKYQLQKESD
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagcaaaaacatataatagtggttgatagcgacgatgccaggcgccagcatgtt
gaaacggttttgtcttttgttggcgaacaataccatgccctggatgaaacccggttagct
gcttatttgctggataaggtcaccacaggcgccgctgctaaagccaaagataaccacccg
gtgctgaccgtgattttatgcggccggctttctccggccctggtggagacagtacagcaa
tacccggccattccttttgtgatccatgatgtgctagatcaacagccgctgtctgcctgc
gtcaatattatcggcgaactgaaaaaaccccttaattatgcccagctgaccgagcttatc
catcattgccaccagtaccataacaaattgccgtccaggcagggcaagaataaatctgcc
aatgccttattccgctctctggtgggggtgagtgaagccatgaaccaggtgcgcttttta
attgagcaggttgccgacactaacgcaactgtgctggttttgggggagtccgggacaggt
aaagaagtggtggcgcgcaatatccacgacctttccgagcgctcaggggcgccttttgtg
ccggtgaactgcggcgccatcccgggggatttgctggaaagtgaattgttcggccatgaa
aaaggcgcctttaccggcgcgatttctgcccgtaaggggcgttttgaactggcggaaggc
ggcaccctgttcctggatgaaatcggggatatgccgcaaccgatgcaggttaagctgtta
agggtgttacaggaacgcacctttgagcgggtaggcggcactaaaagcattaaggcggat
gtccgcattattgccgcgacccatcagcagcttgagggaatgatcaaaaccggagacttc
cgtgaagacttgttttaccgtttaaatgtctttcctatcgaaacgccggcattgcgtgaa
cggcaggaagacgtgcctttattgctgcaggaattggtgaagcgctttgaacaggagcag
ggacatagcgtacgttttaccgatcaggcgatagagtcgctgcagcagcatccctggtcg
ggcaatgtcagggaattgtcgaatttgatcgaacgtatgatcattatgtacggcgatcag
gtggttaatgtcagcgagctgccggccaaataccggcatatagaagtggaagaatatcag
ccggaataccccgaagagctgcaggaaagagaagccatcaacgagctgttctccggtttt
gatgatgaagaagaggacgaaaccgcgacgccgggaaccgggccgtttgacagctttgat
acatttccgcaggaagcttcaacagacggcttattgccggcggagggcctgaacctgaaa
gagcatttggcggagctggaagtttctctggtgacccaggcactggagcgccatgactgg
gtcgttgcccgggctgccgagcttttgggtatgaggcgtaccaccttagtggaaaaaatg
cgtaaataccagctgcaaaaagaaagcgactaa
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