Thalassomonas viridans: SG34_022255
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Entry
SG34_022255 CDS
T08831
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd00061
Fatty acid biosynthesis
tvd00071
Fatty acid degradation
tvd01100
Metabolic pathways
tvd01212
Fatty acid metabolism
tvd02024
Quorum sensing
tvd04146
Peroxisome
Module
tvd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SG34_022255
00071 Fatty acid degradation
SG34_022255
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SG34_022255
09145 Cellular community - prokaryotes
02024 Quorum sensing
SG34_022255
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tvd01004
]
SG34_022255
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvd04147
]
SG34_022255
Enzymes [BR:
tvd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SG34_022255
Lipid biosynthesis proteins [BR:
tvd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SG34_022255
Exosome [BR:
tvd04147
]
Exosomal proteins
Exosomal proteins of breast milk
SG34_022255
Exosomal proteins of breast cancer cells
SG34_022255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WDE04060
UniProt:
A0AAE9YZW7
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All DBs
Position
complement(5067833..5069494)
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AA seq
553 aa
AA seq
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MSNHSSTSPGFDAAGSVFELVQQAMTAYADRPAFSCLGQTLTFKEIEQQSRALSGYLQHN
TNLVPGDRIAIQLPNIIQFPVAAYAALSAGLVIVNTNPLYTTREMAHQFRDAGVKGIIAF
SEVVPKLAQVMQSDDAGCVIETVIVTRADDLLTGEQAISELLAPELAESFSPGVSLTSFN
AAIGAGQAQDARLVKPKGMEALALLQYTGGTTGLSKGAMLSHGNLVANVRQTHEKFAGVQ
QPGEDIYICPLPLYHIYAFMVNLLLAAAQGAHNVLIPNPRDLDAFVGAIKPYAFTCFTGI
NTLFVGLCHHQGFKQLDFSRLKLTISGGSALTLNAANLWHRLTGCTISEGYGLSETSPVL
CFNTPGNEKLGTIGWPLIDTEIEIWDEDNRALSRGETGEIVARGPQVMSGYWQQPQASEQ
ALVNGFFKTGDIGLIHQDGRVQIIDRKKDMILVSGFNVYPNEVEGVLALHPKVLESAVVG
HADESSGEKVCAYIVLEEGVPGDSDNAEYLIAEEVTAYCRSQLSAYKVPKEYHFVGELPK
STVGKILRRELRR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcacagcagtacatcgccgggctttgatgccgcgggcagtgttttcgaactg
gtgcagcaagccatgacggcatatgccgacagaccggcttttagctgtttggggcagacc
ctgacctttaaggaaattgaacagcagtcacgggcgctgtcgggttatctgcaacataat
accaacttagtgccgggtgaccgtattgccatacagttgcccaatatcatccagtttccg
gttgccgcctatgccgccctgtctgcgggcctggtgatcgtcaataccaatcctttgtat
accacccgggagatggcgcaccagttcagggatgccggggtcaaaggcattattgccttc
tcggaggtggtgcctaaactggcacaagtgatgcaaagcgatgacgccggctgcgttatc
gaaaccgtgattgtcactagggccgatgatttgctgacgggggagcaggccatcagcgaa
ttgttagcgcctgaactggcggagagtttttctcccggggtctccctgacgagttttaac
gccgctatcggtgcaggacaagcgcaagatgccaggctggtgaagccaaagggcatggaa
gcgcttgccctgctgcaatataccggcggtaccacaggactgtcaaagggggccatgctc
agtcacggcaacctggtggcgaatgtccggcaaacccatgaaaagttcgccggggtgcag
cagccgggcgaagacatctatatttgtcccttgcccctgtaccatatttacgcctttatg
gtgaatctattactggcggctgcccagggggcccataatgtcttgatccccaatcccagg
gatcttgatgcttttgtaggagcaatcaaaccttatgcctttacctgctttaccggcatt
aataccctgtttgtcggcttgtgccaccaccaggggtttaagcaactggatttctcccgg
ttaaagctgaccatttccggcggcagcgccctgaccctgaatgcggcgaatttatggcac
cggctcaccggctgtaccatctccgaaggttacggcttatcggaaacctcgccggtactg
tgttttaacaccccgggcaatgaaaagctcggcaccatcggctggcccctgatagatacc
gaaattgaaatctgggatgaggacaaccgggccttatcccggggggaaaccggggaaatt
gttgcccgggggccgcaggtgatgtcggggtactggcaacagccccaggccagtgaacag
gcgctggttaacggctttttcaaaaccggcgatatcggcctgattcaccaggatggccgg
gtacagatcatagaccgcaaaaaagacatgattctggtgtccggctttaatgtttatccc
aatgaggttgaaggggtactggcgttgcacccgaaagtattggagtcggcggtggtgggg
catgccgatgagagttcgggggaaaaagtctgtgcctatatagtgttggaagaaggcgta
ccgggggacagcgataatgccgaatacctgatcgccgaagaagtcaccgcctattgccgt
agccagctcagcgcctataaagtgccgaaggaataccattttgtcggggagctgcctaag
tccaccgtaggcaagatattgcgccgggaactgcgccgctaa
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