Thalassomonas viridans: SG34_024865
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Entry
SG34_024865 CDS
T08831
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd00550
Peptidoglycan biosynthesis
tvd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SG34_024865 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tvd01003
]
SG34_024865 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tvd01011
]
SG34_024865 (mrcB)
Enzymes [BR:
tvd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
SG34_024865 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SG34_024865 (mrcB)
Glycosyltransferases [BR:
tvd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SG34_024865 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
tvd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SG34_024865 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Tlde1_dom
DUF1151
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
WDE04528
UniProt:
A0AAF0C8A1
LinkDB
All DBs
Position
complement(5624810..5627146)
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AA seq
778 aa
AA seq
DB search
MAKKKAASSKRNHKSKPQQKAPARSRSWLSWLFFTGLKLTLVAILALAGYAIYLDGKVRR
TFEGQKWQVPVQVYGQVETLQPGEPLDLSGLAASLTYNGYQKVTRVSRPGQFALSKKRII
IFRRAFDFGAGIEPAAELTVDVNQGRISQLYQGSSQVSQLVLEPVLLDRIVPENKEDRVL
VGLENIPEALLDTLLLVEDRDFYFHAGVSPLGILRALVQNIRAGRTVQGGSTLTQQLVKN
MFLTRQKTLWRKLNEALMALILEYRYSKDQLLEAYVNEVYLGQHYANGIYGFGLAAKFYF
GKSVAQLDAGEMALLIGQIKGPSYYDPWRYPERAKKRRDLILRLMFEHHLVSQQAFEAAV
NDPLSVRKSRRLAKQKYPAYLQQVKRELSQHLENYRELSDIKVFTGFSHRSQTLLEQTIA
KRLTALEQDTGEQELQAAMLVTDIASGEIRALSGGRKSNYSGFNRALNARRPVGSLIKPA
VYLAALERYEEYNFATVLDDKAIALASDSGKEWRPKNYDGKYRQQVSLIDSLVLSLNIPT
VNLGMSLGLDAVADAVHLLGYDRDITTRPSMLLGSINMSPLEINQLYLPIAAGGAYQQTH
TITRIVSGQGETLWQFDRPAEPRMSENAAYLLDYALEQVTQRGTARSLSWRLKDKQVAGK
TGTTNDLRDSWFIGYDAHHLVTTWVGRDDNKPMGLTGSSGALVLFADFLKHQGVADKQAV
MPEGIAMILFERQSGNAVTEECDNTELYPAIILAIRVNENCLQKRPDTRSWLELLLGN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaaaaagcagcaagcagcaagagaaatcacaaaagcaagccacagcaaaaa
gcgcctgcccgcagccgaagctggttaagctggctgttttttaccggcctgaagttaacc
ctggtggcgatattggcgctggcgggttatgccatttatcttgacggcaaggttcgccgt
acctttgaagggcaaaaatggcaggtgccggtacaggtatacggccaggtggaaaccttg
cagccgggagagccgctggacctgtcgggactggcggcatcgttgacttacaacggttac
cagaaagtgacccgggtaagccgtcccggacagtttgccttatctaaaaaacgcatcatt
atttttcgccgcgcctttgattttggcgccggtatcgaacctgccgccgagctgacggtg
gatgtcaatcagggcaggatcagccaattgtatcagggcagcagccaggtatcccaactg
gtgcttgagccggtgctgctggaccgcatagtgccggaaaataaagaagatcgggtgctg
gtgggactggaaaatatcccggaagccttgctcgataccctgcttttggtggaagacagg
gacttttacttccatgccggggtttccccgctcgggattttgcgggccctggtgcagaac
atccgcgccgggcgcacggtgcaggggggcagcaccttaacccagcagctggtgaaaaac
atgtttctcacccggcaaaaaacgctgtggcgtaagctgaacgaagccctgatggcgctg
atattggagtacaggtacagcaaagaccagttgctggaagcttatgtcaacgaggtttat
ctcggccagcattatgccaacggcatctatggtttcggattggcggcaaaattttatttc
ggcaaaagcgtggcgcaactcgatgccggcgaaatggcgttgttgatcggccagatcaag
ggacccagctattatgatccctggcgttaccccgagcgcgctaaaaaacggcgtgacctg
atcctacggctgatgtttgaacatcacttagtaagccagcaggcttttgaagccgcggtt
aatgatcctttgtcggtgcgcaaatcccgccgtttggcgaagcaaaagtatcccgcttac
ttgcagcaggtcaaacgagagttgtcccaacacctggagaattaccgggagctgtcggat
atcaaggtatttaccggcttttcccaccgcagccagaccttgctggagcaaaccattgcc
aagaggctgacggcactggaacaagacaccggagagcaggagctgcaggcggccatgctg
gtaaccgatattgccagcggtgaaatccgggcgttaagcggcggccgcaaaagcaactat
tctggctttaaccgggcgttaaacgccaggcgtccggtgggttctttgattaagcccgcg
gtttacctggcggcgctggaaaggtatgaagaatataactttgctactgtgctggatgac
aaggccattgccctggccagcgacagcggcaaagagtggcgtccgaaaaactatgacggc
aagtaccggcagcaggtgtctttaattgacagcctggtattgtcgttaaatattcccacc
gtaaacctgggcatgtccctggggctggatgcggttgccgatgccgtacatttgctcggt
tatgaccgggatattaccacccgaccgtctatgctgctcggttccatcaatatgtcgccg
ctggaaatcaaccagctttacttgccgattgctgccgggggagcgtatcagcaaacccat
accattacccgtatagtatccggccagggggaaaccttatggcagtttgaccggccggcg
gaacccaggatgtcggaaaatgccgcctacctgctcgattatgccctggagcaggtgacc
cagcggggcacggcgcgttccctgagctggcgtctgaaagacaagcaggtggcgggaaaa
acaggtaccaccaatgatctacgcgacagctggtttatcggttacgatgcccaccacctg
gtaactacctgggtcggccgggatgacaataaacctatgggcctgaccggcagcagcggc
gccctggtgttatttgccgactttttaaaacatcagggggttgccgataaacaagcggta
atgccggaagggatcgccatgatcctgtttgagcggcaaagcggcaatgcagtcactgag
gaatgcgataataccgaactttatcctgccatcatcctggctatccgggttaatgaaaat
tgcctgcagaaacgccccgatacccgctcctggctggagctgctgttgggcaattaa
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