Thalassomonas viridans: SG34_025005
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Entry
SG34_025005 CDS
T08831
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SG34_025005 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvd03019
]
SG34_025005 (groL)
03110 Chaperones and folding catalysts [BR:
tvd03110
]
SG34_025005 (groL)
03029 Mitochondrial biogenesis [BR:
tvd03029
]
SG34_025005 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvd04147
]
SG34_025005 (groL)
Enzymes [BR:
tvd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SG34_025005 (groL)
Messenger RNA biogenesis [BR:
tvd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SG34_025005 (groL)
Chaperones and folding catalysts [BR:
tvd03110
]
Heat shock proteins
HSP60 / Chaperonin
SG34_025005 (groL)
Mitochondrial biogenesis [BR:
tvd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SG34_025005 (groL)
Exosome [BR:
tvd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SG34_025005 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SG34_025005 (groL)
Exosomal proteins of breast cancer cells
SG34_025005 (groL)
Exosomal proteins of colorectal cancer cells
SG34_025005 (groL)
Exosomal proteins of bladder cancer cells
SG34_025005 (groL)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TolA_bind_tri
DUF5891
NNH2
Motif
Other DBs
NCBI-ProteinID:
WDE04554
UniProt:
A0AAE9Z1Y4
LinkDB
All DBs
Position
complement(5657430..5659082)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVLFGNDARVKMLNGVNILADAVKVTLGPKGRNVVLDKSFGGPSITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVNEGLKSIAAGMNPMDLKRGI
DKAVTAAVEELKGISQECSDNKAIEQVGTISANSDTSVGEIIATAMDKVGTEGVITVEEG
QALTDELDVVEGMQFDRGYLSPYFINNQESGLVELENPFILLVDKKVSNIRELLTTLEGV
AKAGKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEIGMELEKATLEDLGQAKRVVISKDNTTIIDGIGEEADIQSRVAQIRGQIEESSSDY
DKEKLQERLAKLAGGVAVIKIGAATEIEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RAADKIKALEGSNEDQTHGINVAIRAMEAPLRQIVNNCGDEASVVLNEVRSGEGNFGYNA
GNSTYGDMLEMGILDPTKVTRSALQFAASVAGLMLTTEAMVTDVPAKDTAAPAMPDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgttttatttggaaatgatgcccgcgtaaaaatgctgaacggcgta
aatattttagctgacgcggtaaaagtgactttaggccctaaaggccgcaatgtagtatta
gacaaaagctttggtggtccttctatcactaaagacggtgtttccgtggcaaaagaaatc
gagctggaagacaagttcgaaaacatgggcgcacaaatggtgaaagaagttgcttctaaa
gccaatgacgaagcgggtgacggtactactactgctaccgtattggcccaggcgatcgtt
aacgaaggtttaaaatctattgccgccggcatgaaccctatggatctgaagcgcggtatc
gacaaagccgttactgctgccgtggaagagctgaaaggcatttcacaggaatgttctgac
aacaaagccatcgagcaggtaggtactatctctgccaactctgatacctcagtgggtgaa
atcatcgccacggctatggataaagtgggcaccgaaggtgttattaccgttgaagaaggc
caggcattaacggatgagctggacgtagttgaaggtatgcagttcgaccgcggttacctg
tctccttacttcatcaacaaccaggaaagcggtttagttgagctggaaaatcctttcatc
ctgttggtagacaaaaaagtttccaacatccgtgaactgttaaccacgttagaaggtgtt
gccaaagccggtaagccgctgttgatcattgccgaagatgttgaaggcgaagccttagcc
actttagttgtcaacaacatgcgcggcatcgtaaaagttgctgccgttaaagcgcctggc
ttcggtgaccgccgtaaagccatgctgcaagacatcgctatcttaactgccggtactgtg
atttctgaagaaatcggtatggagctggaaaaagccactctggaagatttaggccaggcg
aagcgtgttgttatctctaaagacaacactactattatcgacggtatcggtgaagaagcc
gatatccagagccgtgttgcccaaatccgcggtcagattgaagagtcttcttcagactac
gataaagaaaaactgcaagagcgcttagccaagctggccggcggtgttgcggtaatcaag
atcggtgctgccactgaaattgaaatgaaagagaagaaagcccgtgtagaagatgccctt
cacgctacccgcgccgccgttgaagaaggtgtggttgccggtggtggtgttgccctggta
cgcgccgctgacaagattaaagcacttgaaggcagcaacgaagaccagactcacggcatc
aatgttgctatccgcgccatggaagctccgcttcgccaaatcgttaacaactgcggcgac
gaagcctctgtagtactgaacgaagtacgcagcggcgaaggtaacttcggctacaacgca
ggtaacagcacatacggcgatatgctggaaatgggtatcctggatccgactaaagtaacc
cgtagcgcactgcagtttgctgcttctgttgccggtttaatgctgactaccgaagctatg
gtaaccgacgtaccagctaaagatactgctgctccagctatgcctgatatgggcggtatg
ggcggtatgggtggtatgggcggcatgatgtaa
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