Thalassomonas viridans: SG34_025200
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Entry
SG34_025200 CDS
T08831
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd00071
Fatty acid degradation
tvd00280
Valine, leucine and isoleucine degradation
tvd00310
Lysine degradation
tvd00362
Benzoate degradation
tvd00380
Tryptophan metabolism
tvd00410
beta-Alanine metabolism
tvd00640
Propanoate metabolism
tvd00650
Butanoate metabolism
tvd00907
Pinene, camphor and geraniol degradation
tvd00930
Caprolactam degradation
tvd01100
Metabolic pathways
tvd01110
Biosynthesis of secondary metabolites
tvd01120
Microbial metabolism in diverse environments
tvd01200
Carbon metabolism
tvd01212
Fatty acid metabolism
Module
tvd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SG34_025200 (fadB)
00650 Butanoate metabolism
SG34_025200 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SG34_025200 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SG34_025200 (fadB)
00310 Lysine degradation
SG34_025200 (fadB)
00380 Tryptophan metabolism
SG34_025200 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SG34_025200 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SG34_025200 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SG34_025200 (fadB)
00930 Caprolactam degradation
SG34_025200 (fadB)
Enzymes [BR:
tvd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SG34_025200 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SG34_025200 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SG34_025200 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
SG34_025200 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
ZirS_C
Motif
Other DBs
NCBI-ProteinID:
WDE04591
UniProt:
A0AAF0C8P5
LinkDB
All DBs
Position
complement(5699663..5701831)
Genome browser
AA seq
722 aa
AA seq
DB search
MIFQGNSLSAQLLDDGIVELKYDAQGSVNKFDQATFEDFRAAVEAINNCADAKGVMVTSG
KPAFIVGADITEFLETFKQPEDQLIPWVKAASDVFDSFEDIQLPTIAAINGFALGGGCEM
TLACDYRVADTSVSIGLPEVKLGLMPGFGGTVRLPRLIGADNAVEWMSTGKAHKAEQALA
AGVLDAVVEPEKLRSAALNMLKAAIDGKLDWRAKRQPKLEPLKLSKIEHMMTFNTCKGMI
AAKAGKHYPAPMVTVNTIEAAAGLDRAGAMAMENAGFAKLAKTEAATAQIGIFMADQVIK
GKAKKAGKQAKKAVNKAAVLGAGIMGGGIAYQSAYKGTPIIMKDINDQALDLGLTTAAGI
LTKQVERGRMDAKKMAKVLNNITPSLNYDSVKDVDVVVEAVVENPKVKTAVLAEVENLVS
EDAIVTSNTSTISIDLLAKDLKRPENFCGMHFFNPVHKMPLVEVIRGKDTSDETVAAVVA
YAAKMGKSPIVVNDCPGFYVNRVLFPYFAGFSHLVLEGADFTAVDKVMEKQFGWPMGPAY
LLDVVGIDTADHCTGVMSAGFPTRMAKLENDPVSTLYQNDRYGQKNGKGFYDYGTDKRGK
PTKVPAQAAYELFAASCSDKKEFAADEIIARLMIPLVNEVIRCLEEGVVDSAAEADMGLL
YGLGFPPFRGGPIRYLETLGLDNFIAMADKYAHLGEIYQVTDGLREMAKSGQSYFSTDVK
KA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatatttcaaggcaacagcctttctgcccaattattagacgatggtatcgttgaactt
aaatacgatgcgcagggatcggttaataaatttgatcaggcaacatttgaagatttcagg
gctgcagttgaggccatcaataactgtgcggatgccaaaggcgttatggttacctcaggc
aaacctgcctttattgtcggcgccgacatcacggaatttttagaaacctttaaacaaccg
gaagaccagcttatcccttgggtcaaagctgcttctgatgttttcgattcgtttgaagat
attcaattacctaccatcgccgccatcaatggctttgccctgggcggcggttgtgaaatg
actttagcctgtgattaccgggttgccgatactagcgtcagcataggcctgccggaagta
aaactgggcctgatgccgggttttggcggcacggtacgtttaccccgcttgatcggcgcc
gacaatgccgttgagtggatgtctaccggtaaagctcacaaggctgagcaggcactggcg
gcaggcgtgttagacgccgtggttgagccggaaaaattacgctcagccgcccttaacatg
cttaaagccgctatcgacggcaagctggactggcgcgcgaaacgccagccgaaacttgag
ccgttaaagttaagcaaaatcgaacatatgatgacctttaatacctgtaaaggcatgata
gcggcaaaagcgggcaagcattacccggcccctatggtcacggttaatactatcgaagcg
gcggccggtttagatcgcgccggcgccatggcgatggaaaatgccggttttgccaagctg
gcgaaaaccgaagccgctaccgcgcaaatcggtatctttatggcggaccaggtcatcaaa
ggcaaggcgaaaaaagccggcaagcaggcgaaaaaagccgtcaacaaggcggcggtcctg
ggggccggcatcatgggtggcggtatcgcctaccagtcggcctataaaggcacgcctatt
atcatgaaagacatcaatgaccaggcgcttgatcttggcttaaccacagcagccggtatt
ttaaccaagcaggtggaacgcggccgtatggacgccaagaaaatggccaaggtactgaac
aatatcaccccgagcttaaactatgacagcgttaaagacgtcgacgtcgtggtcgaagcc
gtggtggaaaacccgaaagtgaaaactgcggtactggcggaagtggaaaacctggtgagc
gaagatgccatcgtgacttccaatacttcgaccatctccattgacttgctggccaaggac
ttaaaacgtccggaaaacttctgtggcatgcatttcttcaaccctgtgcataaaatgccg
ttggttgaagttatccgcggtaaagacacttccgatgaaaccgtggcggccgtggttgcc
tatgcggcgaaaatgggcaaatcccctatcgtggtaaacgactgtccgggtttctatgtt
aaccgggtattattcccttactttgccggtttcagccatttagtgctggaaggcgccgac
ttcactgccgtcgataaggtgatggagaagcagttcggctggcctatgggtcctgcctac
ctgcttgatgttgttggtatcgataccgccgatcattgtaccggcgtgatgtctgccggc
ttcccgacccgcatggccaaactggaaaatgatcctgtcagcaccttataccagaacgac
aggtacggtcagaaaaacggtaaaggtttctacgactacggcaccgacaagcgcggcaag
cccaccaaagttcctgctcaagctgcttatgaattattcgccgccagctgcagcgataag
aaagagttcgccgccgatgaaatcatcgcccgcttgatgatcccgctggtgaacgaagtg
atccgttgtctggaagaaggcgtggtagacagtgccgccgaagccgatatgggcttgtta
tacggtttaggtttccctccgttcaggggcggtcctatccgttacctggaaacgctgggc
ttagataactttattgccatggccgataaatacgcccatttaggtgaaatttaccaggtg
accgatggcttgcgtgaaatggccaaatcaggccagtcttacttttccactgacgttaaa
aaagcttaa
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