Thalassomonas viridans: SG34_027765
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Entry
SG34_027765 CDS
T08831
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd00630
Glyoxylate and dicarboxylate metabolism
tvd00680
Methane metabolism
tvd01100
Metabolic pathways
tvd01120
Microbial metabolism in diverse environments
tvd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SG34_027765 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
SG34_027765 (fdhF)
Enzymes [BR:
tvd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
SG34_027765 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_9
Fer4_10
Fer4_6
Fer4_21
Fer4_2
Fer4_18
Fer4_15
Fer4_8
Fer4_16
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
WDE05053
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All DBs
Position
complement(6295246..6298125)
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AA seq
959 aa
AA seq
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MISYYDPKQHPEDKDLGTPAIRGAVAQVTLEIDGCQVTVDEGTSVMRAAALNNINIPKLC
ASDNLEAFGSCRLCAVEIEGMKGMPASCTTPVREGMQVTTQNKKIAKLRRNIMELYISDH
PLDCLTCPSNGDCELQDMAGAVGLRDVRYGFSGENHLDAKGDDSNPYFHFDPSKCIVCSR
CVRACEEVQGTFALTLDGRGFDTKVSTGADNDFLSSDCVSCGACVQACPTSTLMEKSVIE
QGQPEHSVITTCAYCGVGCSFKAEMKGTEVIRMVPYKGGEANRGHSCVKGRFAFGYANHK
DRITSPMIRDSIDQPWREVSWQEAIGFAAGKLQTIQQKYGRDSIGGITSSRCTNEETYLV
QKLIRAAFGNNNTDTCARVCHSPTGFGLKATLGESAGTQTFNSVMDADVVMVIGANPTDA
HPVFGSLLKKRLRQGAGLIIADPRRIDLGISPHVKLDHHLPLRPGTNVAFINAMAYVVVE
EGLEDQAFISKRCEDKNYQQWREFISDQRHSPENTENITGIPAGELRAAARLYARANNAA
IYYGLGVTEHSQGSSMVMGIANLALLTGNIGRDGVGVNPLRGQNNVQGSCDMGSFPHELP
GYQHVAKDELRTKFEQNWGVDIDPEPGLRIPNMFDAAIDGSFKGLYCQGEDIAQSDPNTQ
HVQLALSSLECLVVQDIFLNETAKFAHVFLPGASFLEKDGTFTNAERRINRVRQVMPPLS
GKADWEVTMALSEALGYPMSYQHPSEIMDEIALLTPTFAHVSYEKLEQLGSIQWPCNEQA
PEGTPIMHRESFPIGKATFAVTEYVATEEKANRKFPLLLTTGRILSQYNVGAQTRRTENQ
HWHDEDVLEIHPDDAQERGISEGDWLGIKSRAGDTVLKAQISDRMQPGVVYTTFHHPESG
ANVVTTDNSDWATNCPEYKVTAVQVEKVTSPSKWQERNKQFSKVQQAHLQAAKTPLQTS
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgatttcttattacgatcccaaacagcatccggaagacaaagacctgggcacaccggca
atccgaggcgctgttgctcaggtaacgctggaaatcgacggttgtcaggtaaccgtagac
gaaggcacctcggtgatgcgcgctgcggccctgaacaatatcaatattcccaagttatgc
gcctccgacaacctggaagctttcggttcctgccgtttatgtgcggtggaaattgagggt
atgaaaggcatgcctgcctcctgcaccaccccggtgagggaaggcatgcaggtgaccacg
caaaataaaaagatcgccaaattgcgccgtaatattatggagctgtatatttcagatcat
ccgctggattgcttgacttgccccagcaacggtgattgcgaattacaggatatggcgggc
gctgttggcttaagggatgtgcgctacggtttcagcggtgaaaaccatctcgatgccaaa
ggggatgactccaatccttatttccattttgatcccagcaaatgtatcgtgtgctcccgc
tgcgtgcgtgcctgtgaagaagtgcagggcacttttgccttaaccctggacgggcgcggc
tttgatactaaggtttctaccggggcggacaatgattttctttcttccgattgtgtctcc
tgcggcgcttgtgtccaggcctgtcccacttcaaccctgatggaaaaaagcgtgattgag
cagggccagccggagcatagcgtgattactacctgcgcctattgtggcgtcggctgttcg
tttaaggcagaaatgaaaggcacagaagtgattcgtatggtgccctataaaggcggtgaa
gcaaaccgcggccattcctgtgtgaaaggacgtttcgcctttggttacgctaatcacaaa
gatcgtattaccagccctatgatccgtgactcgatcgaccagccctggcgtgaagtgagc
tggcaagaagccattggttttgctgccggtaaactgcaaactatccagcaaaaatacggt
agagacagcataggtggtatcacgtcttcccgctgtactaacgaagaaacttatttggta
caaaagctgatccgcgccgctttcggcaacaacaataccgatacctgcgcccgggtgtgc
cattccccgacaggtttcggtttaaaggctactctaggggagtctgccggtacccagact
tttaattcggtgatggatgccgatgtggttatggtaatcggcgccaaccccactgatgcc
cacccggtatttggctctttgctgaaaaaacgtttgcgccagggggcagggctgattatt
gccgatccccggcgtatcgatttaggtatcagcccacatgtgaagctggaccaccatctg
ccgttaaggccgggcacgaatgtcgcctttatcaatgccatggcttatgtggttgttgaa
gagggtctggaagatcaggcttttatcagtaagcgttgtgaagataaaaattatcagcaa
tggcgtgagtttatcagcgatcagcgtcattctccggaaaataccgagaatattaccggc
ataccggctggggaattaagggcggcggcgcgtctgtatgccagggcaaataatgccgct
atctattacggcctgggagttaccgagcattcccagggatccagcatggtaatgggcatt
gccaacctggcgctgctgaccggcaatatcggccgtgacggcgtcggcgttaacccgctc
agggggcaaaataatgttcagggttcctgcgatatgggctctttcccccatgaacttccc
ggctaccagcatgtggctaaggatgaactcagaaccaagttcgaacaaaactggggcgta
gatatagatcccgagccgggactgcgtatccccaacatgtttgacgccgccatcgacggc
agctttaaagggctttactgtcagggtgaagatattgcccagtcggatcctaatactcag
catgtgcagctggcgttatcctcattggagtgcctggttgttcaggatattttcctcaat
gaaaccgcgaaatttgcccatgtgtttttgcccggggcgtctttcctggaaaaagacggc
actttcaccaacgccgagcgccgcatcaaccgggtgcgccaggtgatgccgccgttgtcc
ggcaaggcggactgggaggtgactatggctttgtccgaggcgttgggatatcccatgtcg
taccagcatccgtctgagattatggatgaaattgccttgttgaccccgacctttgcccat
gtcagctatgaaaagctggaacagctgggcagcattcagtggccctgtaatgagcaggcg
cccgagggcacgccgatcatgcacagggaaagtttccctatcggcaaggcgacttttgcc
gttaccgagtatgtggcgaccgaagaaaaggctaaccgtaaattcccgttactgctgact
acagggcgtattttgtcccagtacaatgtcggcgcccagacccggcgcacggaaaatcag
cactggcatgacgaggatgtgctggaaatacatcccgacgatgcccaggagcgcggcatc
agcgagggagactggcttggcattaaaagccgtgccggtgataccgtgcttaaggcgcaa
atcagcgaccggatgcagcctggagttgtctatacaactttccatcacccggaaagcggc
gctaatgtggtgactaccgataattcggactgggcgaccaactgtccggaatataaggtt
accgcggtacaggtggaaaaagtgacctcgccgtcgaaatggcaggagcgcaataagcag
ttttcaaaagtgcagcaagcgcatttgcaggcagcaaaaaccccgctgcaaacgagctaa
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