Thalassomonas viridans: SG34_028520
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Entry
SG34_028520 CDS
T08831
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
tvd
Thalassomonas viridans
Pathway
tvd02020
Two-component system
tvd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SG34_028520
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SG34_028520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvd03021
]
SG34_028520
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tvd02035
]
SG34_028520
Transcription machinery [BR:
tvd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SG34_028520
Bacterial motility proteins [BR:
tvd02035
]
Flagellar system
Flagellar assembly proteins
Stator
SG34_028520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
Seryl_tRNA_N
T3SS_ATPase_C
FIN1
Motif
Other DBs
NCBI-ProteinID:
WDE08441
UniProt:
A0AAE9Z7Z4
LinkDB
All DBs
Position
6463760..6464437
Genome browser
AA seq
225 aa
AA seq
DB search
MTLPCQEEEQLLIKYLYLVKRAVSHLRSQVSTLQSYEDLIQIGTMGLLEAIRRYGSEPDD
VFEGYAFKRIRGAILDELRRQDWRPRQARQQAHKLNRARRNLLKELGREPSEEELAAHLE
VDLKQVQAMEFDNVAEEMHSLDELLQVDSNVLSYDSSTDNSEMKQALAQTLALLDKREQL
LLTLYYQYELNMKEIALTLKITESRVCQLHKLAIKHLHTLLAQQL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ctgacgctaccctgtcaggaagaagagcagctgctgatcaaatacctgtatctggtaaaa
agggccgtcagccatttgcgcagccaggtcagtactttgcagtcatacgaagatctgatc
cagataggcaccatgggcctgctcgaagccatccgccgctacggcagtgagcccgacgat
gtcttcgaaggttatgcctttaaacgtatccgcggcgcaattttggatgaactacgccgc
caggactggcgaccgcgccaggccaggcaacaggcccacaagctgaaccgggcccgccgc
aacctgttaaaagagctgggacgcgagccaagcgaagaagagctggcggcgcaccttgaa
gtagacctgaaacaggtacaggcaatggagttcgacaatgttgccgaagagatgcacagc
ctggacgagctgctgcaggtggacagcaatgttttgtcctacgactccagcaccgacaac
agcgaaatgaaacaggcgctggcgcaaaccctggcgctgctggataaaagagaacagctg
ttacttaccctgtattaccaatatgaactgaacatgaaagaaatcgccctgaccctgaaa
atcaccgaatcccgggtttgccagctgcacaaactggcaattaaacatcttcacactctg
ctggcacagcagctctaa
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