KEGG   Thalassomonas viridans: SG34_029250
Entry
SG34_029250       CDS       T08831                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
tvd  Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:tvd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tvd02044]
    SG34_029250 (tssC)
Secretion system [BR:tvd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SG34_029250 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: WDE05327
UniProt: A0AAE9Z556
LinkDB
Position
complement(6660364..6661842)
AA seq 492 aa
MSTEQEQGAAPEGEAQELSFLDRAVAATTQTAPDTTKELMSVLMDQALDGTVTWDKNLTK
TIENAIAAIDGKLSKQLSAIMQQDKFQKLEGSWRGLNKLVKESDLGPDLKIKMADFNQDD
LLEQFEDAPAIDRSPIFNTLYQHEYGTAGGEPYGLLLGDYQFDASDESVSLLRYMGETAA
ACHAPFVAAASPAMFELDSFDVFNEGKPVAPGFDSPAYAAWNSFRESDDARYVSLTLPQT
IARLPYGKKGASVKSFDFEELDLDAEGNPRPTSNDQIVWSNAAYDMGLKMTQAYTATGWC
TSIRGLENGGKVENLANLTYKSDAGDIQQQCPTEVNLTDEREKELSDLGFLPLVHYKSSD
YAVFIGGQTTQKPKTYTDPDATANAAISARLPFIMASSRIAHYLKIMGRDKLGSNLEAAD
VERDLNMWISQFTNPGAIGNEQRAKTPLAESAIKVVEQPGKPGAYSAVAHLRPWLQMEAL
TTSVRMVAKIPG
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgagcactgaacaagaacaaggtgcagcaccggaaggcgaagcgcaggagctgagtttc
ctcgaccgcgccgtcgctgcgactacgcaaacagccccggataccaccaaagagctgatg
tctgtgctgatggaccaggcattggacggtacggtgacctgggacaaaaatcttaccaaa
accatagaaaatgccattgccgccattgacggcaagctgtccaagcagttatccgccatt
atgcagcaggataagttccagaagctggaaggcagctggcgtggcctgaacaagctggtg
aaggaaagtgatctcggtcccgacctgaaaatcaagatggcggattttaaccaggacgat
ttgctggagcagtttgaagatgcgccggcgattgaccgcagtccgatattcaataccctg
taccagcacgaatacggcaccgccggcggtgaaccttatggtttactgctgggtgactac
cagtttgacgccagcgacgaaagcgtttccctgttgcgctacatgggtgaaacggcggcg
gcctgtcatgcgccattcgtggcggcggcttctccggccatgtttgaactggacagcttt
gacgtctttaacgaaggcaagccggttgctcccggctttgattccccggcttatgccgcc
tggaattctttccgtgaaagcgacgatgcccgctacgtgtctctgaccctgccgcaaacc
atcgcccgcttgccttacggtaaaaaaggcgcttcggtgaagtcgttcgattttgaagag
ctggatctggacgccgaaggcaacccgagacccaccagcaatgatcagatcgtctggtca
aacgccgcctacgacatgggactgaaaatgacccaggcctatacggctaccggctggtgt
acttctatccgtggcctggaaaacggcggtaaggtggaaaacctggcgaacctgacctac
aagtcggatgccggtgatatccagcagcaatgtcctaccgaagtgaacttaaccgatgag
cgtgaaaaagagcttagcgatttaggtttcctgcctttagtacattacaaaagttcggat
tatgccgtctttatcggcggtcagacgacccagaagccgaagacctatacggatcccgat
gctaccgccaatgccgccatttcggcgcgcctgccgtttattatggccagcagccgcatc
gcccattacctgaaaattatgggacgcgacaagctgggttctaacctggaagcggcggat
gtggaacgcgatctcaatatgtggatcagccagttcaccaacccgggtgctatcggcaac
gaacaaagggcgaaaaccccgctggcggaatctgccatcaaggtggtggagcagccgggc
aaaccgggcgcctactcggccgtggcccacttaagaccttggttacagatggaagccctg
acgacctctgtacgtatggttgctaaaataccgggttaa

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