Thalassomonas viridans: SG34_029500
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Entry
SG34_029500 CDS
T08831
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tvd
Thalassomonas viridans
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvd03032
]
SG34_029500 (gyrB)
03400 DNA repair and recombination proteins [BR:
tvd03400
]
SG34_029500 (gyrB)
Enzymes [BR:
tvd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SG34_029500 (gyrB)
DNA replication proteins [BR:
tvd03032
]
Prokaryotic type
DNA Topoisomerases
SG34_029500 (gyrB)
DNA repair and recombination proteins [BR:
tvd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SG34_029500 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WDE05367
UniProt:
A0AAF0C7J6
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All DBs
Position
complement(6720671..6723112)
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AA seq
813 aa
AA seq
DB search
MTIENEYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVLDNSIDEALAGHCSD
IVVKIHLDGSVSVRDDGRGIPTEIHPEEGVSAAEVIMTVLHAGGKFGGEDSGYKVSGGLH
GVGISVVNALSNKLKLSIRREGKLHEQIYHLGEPEEPLKVVGESDKTGTEVRFWPSADIF
SDIEFHYDILVKRIRELSFLNSGVSIRLIDEREDGREEHFHYDGGIQAFVEYLNTNKTPV
NEEIFYFDLARDDGIVVEVAMQWNDGFQENIHCFTNNIPQRDGGTHLSGFRTALTRTLNS
YMVKEGLNKKAKGGGETNASGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKSAVEQ
AMGEKLGEYLLEKPVVAKTIIMKIIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQ
EKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMISSQEVGTLI
TALGCGIGRDEYDPEKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIMERGYVYIAQ
PPLYKVKKGKQERYIKDDEALTEYLTTLALDHASIHVNESAPGISGVALEQLVNQYRKTM
DIIKRVSRQIPADILEKMIYSNKIASGDFTDQAKVEAWAKDIIEQLEAQDGNGSIYTVEV
KHDQERHIYYPSFNVRQHGIDKVYNCSYEFIESKEFETILQLNDAINGLMEEGAYVKRGE
KVQPASSFEQALNWLMSESKRGQYIQRYKGLGEMNPDQLWETTMDPETRRMLQVTIEDAI
AADQLFNTLMGDHVEPRRNFIEDNALKVSNLDI
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgacaatagaaaatgaatatgactcttccagtattaaagtactgaaaggtctggatgca
gttcgtaaaagacctggtatgtatataggggatactgatgatggcacaggtttgcatcat
atggtgtttgaagtactggataattctatcgatgaagcgttagctggtcactgtagtgat
attgtcgttaaaattcatctggacggttctgtctcggttcgtgatgacggccgtggcatt
cctaccgaaattcacccggaagaaggggtgtcggctgccgaagttattatgacggtactg
cacgccggtggtaaatttggtggtgaagactcaggttataaagtttccggtggtctgcac
ggcgtaggtatttcggtagtaaatgctttaagtaataaactgaaattaagcattcgtcgt
gaaggtaaattacatgagcagatttaccatttgggtgagccggaagagccgcttaaggtc
gtcggtgaaagtgacaaaaccggtaccgaagtacgtttctggccaagtgccgatatcttt
tcggatatcgaattccattatgacatcctggtgaaacgtatccgggaactttctttcctg
aactcaggggtttctatccgcttaatcgacgagcgtgaagacggccgcgaagaacacttc
cactatgacggcggcatccaggcgtttgttgaatatctcaataccaacaaaaccccggtg
aacgaagaaatcttctatttcgacctggcccgtgatgacggcatagtggttgaagtggcg
atgcaatggaacgatggtttccaggaaaacatccactgtttcaccaacaacattccacag
cgggatggcggtacccacttaagcggtttccgtacggcattaacccgcaccctgaattct
tatatggtgaaagaagggctgaataaaaaagccaaaggcggtggggaaaccaatgcttca
ggtgatgatgcccgtgaaggtttgaccgcggtaatatccgttaaagtacctgatcctaag
ttttcttcacaaaccaaagataagctggtttcttccgaagtgaaaagtgcggttgagcag
gccatgggggaaaagctgggtgagtacctgctggaaaaacctgtggtagccaaaaccatt
atcatgaaaattatcgatgcggcccgtgcccgtgaagcggcccgaaaagcgcgtgaaatg
acacgccgtaaaggtgctttggatattgccggtctgccaggcaagttggctgactgccag
gaaaaagacccggcactgtctgaactgtacatagtggaaggggactctgctggcggttca
gccaagcagggtcgtaaccgtaaaaaccaggctattttgccgctgaaaggtaaaatcctg
aacgtggaaaaagcccgcttcgataagatgatttcttcccaggaagtcggcactctgatc
acagccttaggttgcggtatcggccgcgatgaatacgaccctgagaaattacgctaccac
agtatcatcatcatgaccgatgcggacgtcgatggttcccacatccgtaccttattgttg
accttcttctaccgtcaaatgccggaaattatggagcggggttatgtttatattgcccag
ccgcctttatataaagtgaagaaaggtaagcaggaacgctacatcaaagacgatgaagcc
ctgaccgaatacctgaccactttggcattggaccatgcttcgattcacgtcaatgaatcc
gccccgggcatcagtggcgttgctttagagcagttggtgaatcagtaccgtaaaaccatg
gatattatcaaacgggtatcgcgtcagatcccggcggatatcctggagaaaatgatttat
agcaataagattgccagcggcgatttcaccgaccaggcaaaagttgaagcctgggccaag
gatattatcgagcagctggaagcccaggacggtaacggttctatctacacggttgaagtg
aagcacgatcaggaacgtcatatctactacccgagcttcaatgtcagacagcacggtatc
gacaaagtatataactgcagctatgagtttatcgagtcgaaagaattcgaaacgattttg
cagcttaacgatgccatcaacggtctgatggaagaaggcgcttatgttaaacgcggcgag
aaagtccagccggcttcaagcttcgaacaagcgctgaattggctgatgtcagaatcgaaa
cgcggccaatacatccagcgctataagggactgggtgagatgaacccggatcagctgtgg
gaaaccactatggatccggaaacccgccgcatgctgcaggtgaccatagaagatgctatt
gccgccgatcagctgtttaacaccctgatgggtgaccatgttgaaccgcgtagaaacttc
attgaagataatgcgttaaaagtatctaatttagatatctag
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