Thalassomonas viridans: SG34_031890
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Entry
SG34_031890 CDS
T08831
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
tvd
Thalassomonas viridans
Pathway
tvd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SG34_031890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvd02000
]
SG34_031890
02044 Secretion system [BR:
tvd02044
]
SG34_031890
Transporters [BR:
tvd02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SG34_031890
Secretion system [BR:
tvd02044
]
Type I secretion system
Adhesin protein transporter
SG34_031890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
Peptidase_C39
SMC_N
Zeta_toxin
AAA_13
AAA
AAA_29
AAA_15
AAA_23
AAA_18
Mg_chelatase
AAA_28
NACHT
AAA_22
IstB_IS21
AAA_24
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WDE08526
UniProt:
A0AAE9Z8A0
LinkDB
All DBs
Position
pTvir:720154..722337
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AA seq
727 aa
AA seq
DB search
MQATNQWTINASQPLSAAPLLDSLVLLCQHFGNPCSAEALSAGLPLDGGELSPELLPQAA
ARAGLSARLVRKGLNELPAMLLPCILLLKDKNACVLQELDLAQNQAVISLPETGGEERLT
VAELEAHFVGYLFLIKQVYRGDRHFDVHVHKSNEHWLWQHLKSSAPIYRDVLIASVMVNI
FALVSPLFVMNIYDKVVPNLAFDSLWVLAVGAGIAFIFDLVLKQLRGYLIDVAGKKVDID
ISSKLFAKAIGVPLEKRAASVGGMAKQLSEFDSIREFLSSATVTALVDLPFAALFMLCIY
LVAGDLVLFPLVSCLLIIGYTVFCQPKLRSAIEQSNKFSGLRHGHLIECLGAIEPIKANG
AEGVVQSTWQQMTGHSASWQLKAKMITNSVVNFAGLIVQVSVVGVVVLGVYRVSDNLISM
GGIIAAVLLTARAIAPVAKLAGLMTRSNQAISALKQLDALMVLEGEFEDKAHLPSRAKLS
GNITLDNVGFSYPGADRASLQQISSSIRPGEKIAIVGSNGSGKTTLAKLLAGLLQPTSGS
LQFDGVNHRQIHPGDLRRNLGYLPQDITLFHGTIRDNILFGTRQITEYQLIRAVQLSGVH
AFTDHQTLGLDQQVGECGRALSRGQRQSVALARAILNSPPILLLDEPTASLDARAEKQFM
QAVGATAKDRTLLLITHKMELLRLVDRILVLDKGKLVMDGPKDKVLQQLSGGQAKQRSDQ
AKQKVGL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggcaacaaaccaatggacaattaatgcttcacagccgctatcggcagcgcctttg
ctcgatagcctggtcctgctttgccagcatttcggcaatccctgttcggctgaggctttg
tctgccggtttgccgctcgacggcggcgaactctcccccgagcttttaccccaggccgct
gcccgcgccggcctcagtgcccgcctggtccgcaagggattaaatgaattaccggccatg
ctgctgccctgtatcttgctgcttaaagataaaaatgcctgcgtattgcaggagctggat
ctggcgcaaaaccaggcggttatttctttgccggaaaccgggggagaagagcggcttacg
gttgccgagcttgaagcacattttgtcggctacctgtttttgatcaaacaggtataccgc
ggcgaccgccattttgatgtgcatgtccacaagtcaaacgagcattggctgtggcaacac
cttaaaagttcggcgcccatctaccgggatgtgcttatagcctcggttatggtgaatatt
tttgccctggtgtcgccgctttttgtcatgaacatttatgacaaggtcgtgcctaacctg
gccttcgactccctctgggtactggccgtaggggcgggcattgcttttatctttgacctt
gtcctcaagcaattgcgtggctaccttattgatgtcgccggaaaaaaagtggatatcgat
atctcgtcgaaattgtttgccaaggccatcggcgtaccgctggaaaagcgcgccgccagt
gtcggcggcatggcgaaacagctgagcgagttcgacagcattagggaatttctgtcgtcg
gcaacggtgaccgccctggtggatttgccttttgccgctttgtttatgctctgcatctac
ctggtcgccggggatctggtgttgtttcccctggtgtcctgtctgctgatcatcggctat
acggttttttgccagccgaagctgcgcagtgccatcgaacaaagcaacaaattttccggc
ctgcgccacgggcatttaatcgaatgcctgggggccatagaaccgatcaaggccaacggc
gcagaaggcgtagtgcagagcacctggcagcaaatgacgggacacagcgccagctggcag
cttaaagccaaaatgatcaccaactctgtggttaactttgccggtcttatcgtacaagtt
tctgtagtcggcgtagtggtgttaggggtctaccgggtgtcggacaatttgatttctatg
ggaggcattatcgctgccgtgctgctgaccgcacgggccatagcaccggtggccaaactt
gccgggctgatgacccgctccaaccaggctatcagcgccctgaaacagcttgatgcgcta
atggtgctggaaggggaatttgaagataaggcccatctgccgagcagggccaaactatcc
ggcaatatcaccctggataatgtcggctttagctatcccggcgccgatcgcgccagttta
cagcaaatctcatccagtatccgcccgggagagaaaattgccattgtcggcagtaacggc
tcgggcaaaacgactttggccaagctgttagccgggctgctgcaaccgaccagcggcagc
ctgcaattcgatggcgtcaatcacaggcaaatccaccccggcgatctgcgccgcaacctg
ggctatttaccccaggatatcaccctgtttcacggcaccatacgggataatatccttttc
ggcacccggcaaataaccgaatatcaactgatccgggcggtacagctgtccggcgtacac
gcctttaccgaccaccagactttggggctggatcaacaggtgggggaatgcggccgcgcc
ttatcccggggacagcgccagtcggtggccctggcccgggccattttaaactccccgccg
attttattgctggacgagcctaccgccagcctggacgcccgcgcggaaaaacagtttatg
caggctgtcggcgccaccgccaaagaccgtaccttgctgctgatcacccataaaatggag
ttactgcgcctggtggaccgtatcctggtgctggataagggcaaactggtgatggacggc
cccaaagacaaagtactgcagcagcttagcggcggccaggccaagcaacgtagtgaccag
gctaagcagaaggtgggcttatga
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